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8B1N

Crystal structure of TrmD-Tm1570 from Calditerrivibrio nitroreducens in complex with S-adenosyl-L-methionine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
tRNA (guanine-N(1)-)-methyltransferasepolymer43649997.12UniProt (E4THH1)
Pfam (PF01746)
Pfam (PF09936)
Calditerrivibrio nitroreducens DSM 19672M1G-methyltransferase,tRNA [GM37] methyltransferase
2C, N
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
3D, E, O, P
(A, B)
CHLORIDE IONnon-polymer35.54Chemie (CL)
4F, G, Q, R
(A, B)
S-ADENOSYLMETHIONINEnon-polymer398.44Chemie (SAM)
5H, I, J, K, L...
(A, B)
GLYCEROLnon-polymer92.18Chemie (GOL)
6U, V
(A, B)
waterwater18.0665Chemie (HOH)
Sequence modifications
A, B: 1 - 433 (UniProt: E4THH1)
PDBExternal DatabaseDetails
Gly -2-expression tag
Pro -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight99994.1
Non-Polymers*Number of molecules18
Total formula weight2520.9
All*Total formula weight102515.1
*Water molecules are not included.

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PDB entries from 2025-12-24

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