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8AXS

Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AExo-alpha-sialidasepolymer57864362.61UniProt (A0A7G6DVF6)
Pfam (PF13088)
In PDB
Akkermansia muciniphila
2BExo-alpha-sialidasepolymer57664278.41UniProt (A0A7G6DVF6)
Pfam (PF13088)
In PDB
Akkermansia muciniphila
3A, BN-acetyl-beta-neuraminic acidnon-polymer309.33Chemie (SLB)
4AIMIDAZOLEnon-polymer69.11Chemie (IMD)
5A, B1,2-ETHANEDIOLnon-polymer62.16Chemie (EDO)
6A, BCHLORIDE IONnon-polymer35.54Chemie (CL)
7A, BCALCIUM IONnon-polymer40.12Chemie (CA)
8ASULFATE IONnon-polymer96.11Chemie (SO4)
9B2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACIDnon-polymer291.31Chemie (DAN)
10waterwater18.01416Chemie (HOH)
Sequence modifications
A: 23 - 595 (UniProt: A0A7G6DVF6)
PDBExternal DatabaseDetails
Met 22-initiating methionine
Val 477Ala 477conflict
Lys 516Arg 516conflict
Ala 598-expression tag
Ala 599-expression tag
Ala 600-expression tag
Ala 601-expression tag
B: 23 - 595 (UniProt: A0A7G6DVF6)
PDBExternal DatabaseDetails
Met 22-initiating methionine
Val 477Ala 477conflict
Lys 516Arg 516conflict
Ala 596-expression tag
Glu 597-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight128641.0
Non-Polymers*Number of molecules18
Total formula weight1978.6
All*Total formula weight130619.6
*Water molecules are not included.

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PDB entries from 2024-05-15

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