8AXI
Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Sialidase domain-containing protein | polymer | 576 | 64320.5 | 2 | UniProt (B2ULI1) Pfam (PF13088) | Akkermansia muciniphila | |
| 2 | C, D (C, D) | beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-gulopyranose | branched | 383.3 | 2 | In PDB | |||
| 3 | E, M (A, B) | 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID | non-polymer | 291.3 | 2 | Chemie (DAN) | |||
| 4 | F, N (A, B) | beta-D-galactopyranose | non-polymer | 180.2 | 2 | Chemie (GAL) | |||
| 5 | G, L (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 6 | H, I, J, O, P (A, B) | CHLORIDE ION | non-polymer | 35.5 | 5 | Chemie (CL) | |||
| 7 | K, Q (A, B) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 8 | R, S (A, B) | water | water | 18.0 | 1537 | Chemie (HOH) |
Sequence modifications
A, B: 23 - 595 (UniProt: B2ULI1)
| PDB | External Database | Details |
|---|---|---|
| Met 22 | - | initiating methionine |
| Leu 596 | - | expression tag |
| Glu 597 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 128641.0 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 766.7 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 1324.4 | |
| All* | Total formula weight | 130732.1 |
