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8AMS

Complex of human TRIM2 RING domain, UBCH5C, and Ubiquitin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BUbiquitin-conjugating enzyme E2 D3polymer14916955.42UniProt (P61077)
Pfam (PF00179)
In PDB
Homo sapiens (human)(E3-independent) E2 ubiquitin-conjugating enzyme D3,E2 ubiquitin-conjugating enzyme D3,Ubiquitin carrier protein D3,Ubiquitin-conjugating enzyme E2(17)KB 3,Ubiquitin-conjugating enzyme E2-17 kDa 3,Ubiquitin-protein ligase D3
2C, DTripartite motif-containing protein 2polymer15316914.52UniProt (Q9C040)
Pfam (PF13445)
Pfam (PF00643)
In PDB
Homo sapiens (human)E3 ubiquitin-protein ligase TRIM2,RING finger protein 86,RING-type E3 ubiquitin transferase TRIM2
3EPolyubiquitin-Cpolymer10111639.21UniProt (P0CG48)
Pfam (PF00240)
In PDB
Homo sapiens (human)
4A, B, C, DGLYCEROLnon-polymer92.19Chemie (GOL)
5C, DZINC IONnon-polymer65.44Chemie (ZN)
6D3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOLnon-polymer370.41Chemie (PE8)
7waterwater18.0158Chemie (HOH)
Sequence modifications
A, B: 1 - 147 (UniProt: P61077)
PDBExternal DatabaseDetails
Gly -1-expression tag
His 0-expression tag
Arg 22Ser 22engineered mutation
Ser 85Cys 85engineered mutation
C, D: 8 - 157 (UniProt: Q9C040)
PDBExternal DatabaseDetails
Gly 5-expression tag
Ala 6-expression tag
Met 7-expression tag
E: 0 - 76 (UniProt: P0CG48)
PDBExternal DatabaseDetails
Met -24-initiating methionine
Lys -23-expression tag
His -22-expression tag
His -21-expression tag
His -20-expression tag
His -19-expression tag
His -18-expression tag
His -17-expression tag
Pro -16-expression tag
Met -15-expression tag
Ser -14-expression tag
Asp -13-expression tag
Tyr -12-expression tag
Asp -11-expression tag
Ile -10-expression tag
Pro -9-expression tag
Thr -8-expression tag
Thr -7-expression tag
Glu -6-expression tag
Asn -5-expression tag
Leu -4-expression tag
Tyr -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight79379.0
Non-Polymers*Number of molecules14
Total formula weight1460.9
All*Total formula weight80839.9
*Water molecules are not included.

222036

PDB entries from 2024-07-03

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