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8ALK

Structure of the Legionella phosphocholine hydrolase Lem3 in complex with its substrate Rab1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1APhosphocholine hydrolase Lem3polymer46952900.61UniProt (Q5ZXN5)
In PDB
Legionella pneumophilaDephosphocholinase Lem3
2BRas-related protein Rab-1Bpolymer17519725.41UniProt (Q9H0U4)
Pfam (PF00071)
In PDB
Homo sapiens (human)
3A, BCALCIUM IONnon-polymer40.14Chemie (CA)
4BGUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
5B2-[[[5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxyethyl-[3-(2-chloranylethanoylamino)propyl]-dimethyl-azaniumnon-polymer608.91Chemie (OJU)
6waterwater18.076Chemie (HOH)
Sequence modifications
A: 21 - 486 (UniProt: Q5ZXN5)
PDBExternal DatabaseDetails
Gly 18-expression tag
His 19-expression tag
Met 20-expression tag
Ser 134Cys 134engineered mutation
Ser 209Cys 209engineered mutation
Cys 391Thr 391engineered mutation
Ser 456Cys 456engineered mutation
B: 3 - 174 (UniProt: Q9H0U4)
PDBExternal DatabaseDetails
Gly 0-expression tag
Pro 1-expression tag
Met 2-expression tag
Thr 76Ser 76engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight72626.0
Non-Polymers*Number of molecules6
Total formula weight1212.4
All*Total formula weight73838.4
*Water molecules are not included.

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PDB entries from 2024-07-17

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