8AE5
Crystal structure of human legumain in complex with macrocypin 1a
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C (A, B) | Legumain | polymer | 263 | 30133.8 | 2 | UniProt (Q99538) Pfam (PF01650) | Homo sapiens (human) | Asparaginyl endopeptidase,Protease,cysteine 1 |
2 | B, D (C, D) | Macrocypin-1a | polymer | 177 | 20283.6 | 2 | UniProt (B9V973) | Macrolepiota procera (parasol mushroom) | |
3 | E (E) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
4 | F, G, J, K (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
5 | H, I, L, M, N (A, C, B, D) | SULFATE ION | non-polymer | 96.1 | 5 | Chemie (SO4) | |||
6 | O, P, Q, R (A, C, B, D) | water | water | 18.0 | 80 | Chemie (HOH) |
Sequence modifications
A, B: 26 - 288 (UniProt: Q99538)
C, D: 1 - 169 (UniProt: B9V973)
PDB | External Database | Details |
---|---|---|
Snn 147 | Asp 147 | modified residue |
PDB | External Database | Details |
---|---|---|
Leu 170 | - | expression tag |
Glu 171 | - | expression tag |
His 172 | - | expression tag |
His 173 | - | expression tag |
His 174 | - | expression tag |
His 175 | - | expression tag |
His 176 | - | expression tag |
His 177 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 100834.9 | |
Branched | Number of molecules | 1 |
Total formula weight | 424.4 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 1365.1 | |
All* | Total formula weight | 102624.4 |