8A6E
100 picosecond light activated crystal structure of bovine rhodopsin in Lipidic Cubic Phase (SACLA)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Rhodopsin | polymer | 349 | 39057.5 | 2 | UniProt (P02699) Pfam (PF10413) Pfam (PF00001) | Bos taurus (cattle) | |
| 2 | C, D (C, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 3 | E, S (A, B) | RETINAL | non-polymer | 284.4 | 2 | Chemie (RET) | |||
| 4 | F, T (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 5 | G (A) | LAURIC ACID | non-polymer | 200.3 | 1 | Chemie (DAO) | |||
| 6 | H, I, J, K, L... (A, B) | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate | non-polymer | 356.5 | 13 | Chemie (OLC) | |||
| 7 | M, W (A, B) | PALMITIC ACID | non-polymer | 256.4 | 2 | Chemie (PLM) | |||
| 8 | Y, Z (A, B) | water | water | 18.0 | 140 | Chemie (HOH) |
Sequence modifications
A, B: 402 - 749 (UniProt: P02699)
| PDB | External Database | Details |
|---|---|---|
| Ace 401 | - | acetylation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 78115.0 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 848.8 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 6359.5 | |
| All* | Total formula weight | 85323.3 |
