8A49
Endoglycosidase S in complex with IgG1 Fc
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | IgG1 Fc | polymer | 227 | 25641.1 | 2 | Pfam (PF07654) UniProt (by SIFTS) (P0DOX5) In PDB | Homo sapiens | |
2 | C, D | Secreted endoglycosidase EndoS | polymer | 906 | 102372.3 | 2 | UniProt (Q9APG4) Pfam (PF20746) Pfam (PF22382) UniProt (by SIFTS) (Q99Y92) In PDB | Streptococcus pyogenes | |
3 | E | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1463.3 | 1 | In PDB GlyTouCan (G80858MF) | |||
4 | water | water | 18.0 | 68 | Chemie (HOH) |
Sequence modifications
C, D: 100 - 995 (UniProt: Q9APG4)
PDB | External Database | Details |
---|---|---|
Met 99 | - | initiating methionine |
Ala 233 | Asp 233 | engineered mutation |
Leu 235 | Glu 235 | engineered mutation |
Leu 996 | - | expression tag |
Leu 997 | - | expression tag |
Glu 998 | - | expression tag |
His 999 | - | expression tag |
His 1000 | - | expression tag |
His 1001 | - | expression tag |
His 1002 | - | expression tag |
His 1003 | - | expression tag |
His 1004 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 256026.9 | |
Branched | Number of molecules | 1 |
Total formula weight | 1463.3 | |
All* | Total formula weight | 257490.2 |