7ZIQ
BK Polyomavirus VP1 in complex with 6'-Sialyllactose glycomacromolecules (aromatic linker)
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E (AAA, BBB, CCC, DDD, EEE) | Capsid protein VP1 | polymer | 275 | 30261.0 | 5 | UniProt (Q65613) Pfam (PF00718) | Betapolyomavirus hominis | |
| 2 | F (AaA) | N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | branched | 633.6 | 1 | In PDB GlyTouCan (G28868ZC) | |||
| 3 | G, I, L, M (BBB, CCC, EEE) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 4 | H, K (BBB, DDD) | N-acetyl-alpha-neuraminic acid | non-polymer | 309.3 | 2 | Chemie (SIA) | |||
| 5 | J (CCC) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 6 | N, O, P, Q, R (AAA, BBB, CCC, DDD, EEE) | water | water | 18.0 | 748 | Chemie (HOH) |
Sequence modifications
AAA, BBB, CCC, DDD, EEE: 30 - 300 (UniProt: Q65613)
| PDB | External Database | Details |
|---|---|---|
| Gly 26 | - | expression tag |
| Ser 27 | - | expression tag |
| His 28 | - | expression tag |
| Met 29 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 151305.2 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 633.6 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 972.9 | |
| All* | Total formula weight | 152911.7 |
