7ZI2
Crystal structure of dCK C4S-S74E mutant in complex with UDP and the dCKi2 inhibitor
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Deoxycytidine kinase | polymer | 280 | 32701.6 | 1 | UniProt (P27707) Pfam (PF01712) | Homo sapiens (human) | dCK,Deoxyadenosine kinase,Deoxyguanosine kinase |
| 2 | B (A) | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 1 | Chemie (UDP) | |||
| 3 | C (A) | N-[3-[[4-[4,6-bis(azanyl)pyrimidin-2-yl]-1,3-thiazol-2-yl]amino]-4-methyl-phenyl]-4-[(4-methylpiperazin-1-yl)methyl]benzamide | non-polymer | 529.7 | 1 | Chemie (J7W) | |||
| 4 | D (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 5 | E (A) | water | water | 18.0 | 37 | Chemie (HOH) |
Sequence modifications
A: 1 - 260 (UniProt: P27707)
| PDB | External Database | Details |
|---|---|---|
| Met -19 | - | initiating methionine |
| Gly -18 | - | expression tag |
| Ser -17 | - | expression tag |
| Ser -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
| Ser 9 | Cys 9 | engineered mutation |
| Ser 45 | Cys 45 | engineered mutation |
| Ser 59 | Cys 59 | engineered mutation |
| Glu 74 | Ser 74 | engineered mutation |
| Ser 146 | Cys 146 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 32701.6 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 956.8 | |
| All* | Total formula weight | 33658.4 |






