7ZI2
Crystal structure of dCK C4S-S74E mutant in complex with UDP and the dCKi2 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-10 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 68.836, 68.836, 123.656 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.720 - 2.180 |
R-factor | 0.2041 |
Rwork | 0.201 |
R-free | 0.26160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kcg |
RMSD bond length | 0.008 |
RMSD bond angle | 1.581 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 60.140 | 60.170 | 2.220 |
High resolution limit [Å] | 2.180 | 5.920 | 2.180 |
Rmeas | 0.126 | 0.061 | 1.959 |
Rpim | 0.038 | 0.020 | 0.581 |
Total number of observations | 174047 | 8357 | 9110 |
Number of reflections | 16221 | 940 | 810 |
<I/σ(I)> | 10.1 | 23.4 | 1.1 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 10.7 | 8.9 | 11.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 285 | 0.9 M Sodium Citrate, 60 mM HEPES pH 7.5 |