7ZDM
Complex I from Ovis aries at pH5.5, Closed state
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | 1 | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial | polymer | 464 | 50687.8 | 1 | UniProt (W5PUX0) Pfam (PF01512) Pfam (PF22461) Pfam (PF10589) In PDB | Ovis aries (sheep) | |
| 2 | 2 | Mitochondrial complex I, 24 kDa subunit | polymer | 246 | 27373.6 | 1 | UniProt (W5NRY1) Pfam (PF01257) In PDB | Ovis aries (sheep) | |
| 3 | 3 | NADH:ubiquinone oxidoreductase core subunit S1 | polymer | 727 | 79519.3 | 1 | UniProt (W5QB34) In PDB | Ovis aries (sheep) | |
| 4 | 4 | Complex I-49kD | polymer | 463 | 52661.5 | 1 | UniProt (A0A7M4DUF9) Pfam (PF00346) UniProt (by SIFTS) (A0A6P3DZ89) In PDB | Ovis aries (sheep) | NADH dehydrogenase [ubiquinone] iron-sulfur protein 2,mitochondrial,NADH-ubiquinone oxidoreductase 49 kDa subunit |
| 5 | 5 | NADH:ubiquinone oxidoreductase core subunit S3 | polymer | 266 | 30384.6 | 1 | UniProt (W5PB27) Pfam (PF00329) In PDB | Ovis aries (sheep) | |
| 6 | 6 | Complex I-20kD | polymer | 223 | 24622.9 | 1 | UniProt (A0A7M4DUG3) Pfam (PF01058) UniProt (by SIFTS) (A0A6P7E5N1) In PDB | Ovis aries (sheep) | NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,mitochondrial,NADH-ubiquinone oxidoreductase 20 kDa subunit |
| 7 | 9 | Complex I-23kD | polymer | 217 | 24496.1 | 1 | UniProt (A0A6P3TFB2) Pfam (PF12838) In PDB | Ovis aries (sheep) | NADH dehydrogenase [ubiquinone] iron-sulfur protein 8,mitochondrial,NADH-ubiquinone oxidoreductase 23 kDa subunit |
| 8 | a | Complex I-9kD | polymer | 109 | 11916.5 | 1 | UniProt (A0A7M4DUF6) Pfam (PF15880) UniProt (by SIFTS) (A0A6P3E7B5) In PDB | Ovis aries (sheep) | NADH dehydrogenase [ubiquinone] flavoprotein 3,mitochondrial,NADH-ubiquinone oxidoreductase 9 kDa subunit |
| 9 | b | NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial | polymer | 124 | 13457.2 | 1 | UniProt (A0A6P7EX23) Pfam (PF10276) In PDB | Ovis aries (sheep) | |
| 10 | c | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial | polymer | 170 | 19382.0 | 1 | UniProt (W5PE07) Pfam (PF04800) In PDB | Ovis aries (sheep) | Complex I-18 kDa,NADH-ubiquinone oxidoreductase 18 kDa subunit |
| 11 | d | NADH:ubiquinone oxidoreductase subunit A9 | polymer | 380 | 43025.6 | 1 | UniProt (W5PI58) Pfam (PF01370) UniProt (by SIFTS) (A0A6P3E3I5) In PDB | Ovis aries (sheep) | |
| 12 | e | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 | polymer | 99 | 11097.8 | 1 | UniProt (A0A6P3E5Z9) Pfam (PF05047) UniProt (by SIFTS) (A0A8N7XJ49) In PDB | Ovis aries (sheep) | |
| 13 | f | Mitochondrial complex I, B13 subunit | polymer | 116 | 13287.5 | 1 | UniProt (W5PNX7) Pfam (PF04716) UniProt (by SIFTS) (A0A836ABR5) In PDB | Ovis aries (sheep) | |
| 14 | g | NADH:ubiquinone oxidoreductase subunit A6 | polymer | 140 | 16302.8 | 1 | UniProt (W5QC06) Pfam (PF05347) In PDB | Ovis aries (sheep) | |
| 15 | h | Mitochondrial complex I, B14.5a subunit | polymer | 114 | 12701.6 | 1 | UniProt (W5P0I2) Pfam (PF07347) In PDB | Ovis aries (sheep) | |
| 16 | i | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 | polymer | 145 | 17115.5 | 1 | UniProt (A0A6P3CXE3) Pfam (PF05071) UniProt (by SIFTS) (A0A8N7XJ18) In PDB | Ovis aries (sheep) | |
| 17 | j, X | Acyl carrier protein | polymer | 157 | 17608.2 | 2 | UniProt (W5NQT7) Pfam (PF00550) In PDB | Ovis aries (sheep) | |
| 18 | A | NADH-ubiquinone oxidoreductase chain 3 | polymer | 115 | 13106.5 | 1 | UniProt (O78753) Pfam (PF00507) In PDB | Ovis aries (sheep) | NADH dehydrogenase subunit 3 |
| 19 | H | NADH-ubiquinone oxidoreductase chain 1 | polymer | 318 | 35884.9 | 1 | UniProt (O78747) Pfam (PF00146) In PDB | Ovis aries (sheep) | NADH dehydrogenase subunit 1 |
| 20 | J | NADH-ubiquinone oxidoreductase chain 6 | polymer | 175 | 19126.6 | 1 | UniProt (O78757) Pfam (PF00499) In PDB | Ovis aries (sheep) | NADH dehydrogenase subunit 6 |
| 21 | K | NADH-ubiquinone oxidoreductase chain 4L | polymer | 98 | 10868.2 | 1 | UniProt (O78754) Pfam (PF00420) In PDB | Ovis aries (sheep) | NADH dehydrogenase subunit 4L |
| 22 | L | NADH-ubiquinone oxidoreductase chain 5 | polymer | 606 | 68438.9 | 1 | UniProt (O78756) Pfam (PF00662) Pfam (PF00361) Pfam (PF06455) In PDB | Ovis aries (sheep) | NADH dehydrogenase subunit 5 |
| 23 | M | NADH-ubiquinone oxidoreductase chain 4 | polymer | 459 | 52086.7 | 1 | UniProt (O78755) Pfam (PF01059) Pfam (PF00361) In PDB | Ovis aries (sheep) | NADH dehydrogenase subunit 4 |
| 24 | N | NADH-ubiquinone oxidoreductase chain 2 | polymer | 347 | 39149.8 | 1 | UniProt (O78748) Pfam (PF00361) Pfam (PF06444) In PDB | Ovis aries (sheep) | NADH dehydrogenase subunit 2 |
| 25 | V | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 | polymer | 141 | 14784.0 | 1 | UniProt (A0A6P3E4K7) Pfam (PF02466) UniProt (by SIFTS) (A0A8N7XJ91) In PDB | Ovis aries (sheep) | Complex I-B14.7,NADH-ubiquinone oxidoreductase subunit B14.7 |
| 26 | W | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial | polymer | 189 | 21614.2 | 1 | UniProt (A0A6P3E6Y9) Pfam (PF09781) UniProt (by SIFTS) (A0A8N7XJ68) In PDB | Ovis aries (sheep) | Complex I-SGDH,NADH-ubiquinone oxidoreductase SGDH subunit |
| 27 | Y | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 | polymer | 171 | 20008.0 | 1 | UniProt (A0A6P3EAP5) Pfam (PF06747) UniProt (by SIFTS) (A0A8N7XJG2) In PDB | Ovis aries (sheep) | |
| 28 | Z | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 | polymer | 175 | 20880.8 | 1 | UniProt (A0A7M4DUF5) Pfam (PF10249) UniProt (by SIFTS) (A0A6P3EI17) In PDB | Ovis aries (sheep) | Complex I-PDSW,NADH-ubiquinone oxidoreductase PDSW subunit |
| 29 | k | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial | polymer | 355 | 40557.1 | 1 | UniProt (W5QBF5) Pfam (PF01712) UniProt (by SIFTS) (A0A8N7XJK5) In PDB | Ovis aries (sheep) | |
| 30 | l | NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 | polymer | 106 | 12605.6 | 1 | UniProt (A0A836D7R1) Pfam (PF10200) In PDB | Ovis aries (sheep) | Complex I-15 kDa,NADH-ubiquinone oxidoreductase 15 kDa subunit |
| 31 | m | NADH:ubiquinone oxidoreductase subunit A3 | polymer | 84 | 9325.9 | 1 | UniProt (W5NYM7) Pfam (PF14987) UniProt (by SIFTS) (A0A836A4Q3) In PDB | Ovis aries (sheep) | |
| 32 | n | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 | polymer | 98 | 11146.7 | 1 | UniProt (A0A6P3E8V0) Pfam (PF08122) UniProt (by SIFTS) (A0A6P7DQB1) In PDB | Ovis aries (sheep) | Complex I-B12,NADH-ubiquinone oxidoreductase B12 subunit |
| 33 | o | NADH dehydrogenase [ubiquinone] 1 subunit C2 | polymer | 122 | 14431.7 | 1 | UniProt (W5P9Q8) Pfam (PF06374) In PDB | Ovis aries (sheep) | |
| 34 | p | NADH:ubiquinone oxidoreductase subunit B4 | polymer | 130 | 15236.4 | 1 | UniProt (W5QF73) Pfam (PF07225) In PDB | Ovis aries (sheep) | |
| 35 | q | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 | polymer | 144 | 16766.5 | 1 | UniProt (A0A6P3E975) Pfam (PF06212) In PDB | Ovis aries (sheep) | |
| 36 | r | Mitochondrial complex I, B17 subunit | polymer | 128 | 15565.1 | 1 | UniProt (W5PZE3) Pfam (PF09782) In PDB | Ovis aries (sheep) | |
| 37 | s | NADH:ubiquinone oxidoreductase subunit B7 | polymer | 137 | 16413.8 | 1 | UniProt (W5P5V3) Pfam (PF05676) UniProt (by SIFTS) (A0A8N7XJH2) In PDB | Ovis aries (sheep) | |
| 38 | t | NADH:ubiquinone oxidoreductase subunit B9 | polymer | 179 | 21779.9 | 1 | UniProt (W5PGA3) Pfam (PF05347) UniProt (by SIFTS) (A0A6P3E749) In PDB | Ovis aries (sheep) | |
| 39 | u | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial | polymer | 108 | 12226.8 | 1 | UniProt (A0A6P3EC72) Pfam (PF14813) UniProt (by SIFTS) (A0A8N7XJB4) In PDB | Ovis aries (sheep) | Complex I-AGGG,NADH-ubiquinone oxidoreductase AGGG subunit |
| 40 | v | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial | polymer | 186 | 21752.6 | 1 | UniProt (W5Q1B0) Pfam (PF05821) In PDB | Ovis aries (sheep) | Complex I-ASHI,NADH-ubiquinone oxidoreductase ASHI subunit |
| 41 | w | Mitochondrial complex I, ESSS subunit | polymer | 154 | 17410.7 | 1 | UniProt (W5PWF1) Pfam (PF10183) UniProt (by SIFTS) (A0A836CQA7) In PDB | Ovis aries (sheep) | |
| 42 | x | NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial | polymer | 76 | 8802.2 | 1 | UniProt (A0A6P3EDV0) Pfam (PF15088) In PDB | Ovis aries (sheep) | Complex I-KFYI,NADH-ubiquinone oxidoreductase KFYI subunit |
| 43 | y | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 | polymer | 58 | 7075.3 | 1 | UniProt (A0A7M4DUG1) Pfam (PF08040) In PDB | Ovis aries (sheep) | Complex I-MNLL,NADH-ubiquinone oxidoreductase MNLL subunit |
| 44 | z | Complex I-MWFE | polymer | 70 | 8211.5 | 1 | UniProt (A0A7M4DUG2) Pfam (PF15879) UniProt (by SIFTS) (A0A6P9FRJ5) In PDB | Ovis aries (sheep) | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1,NADH-ubiquinone oxidoreductase MWFE subunit |
| 45 | 6, 9, 1, 3 | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 6 | Chemie (SF4) | |||
| 46 | 1 | FLAVIN MONONUCLEOTIDE | non-polymer | 456.3 | 1 | Chemie (FMN) | |||
| 47 | 1 | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | non-polymer | 665.4 | 1 | Chemie (NAI) | |||
| 48 | 2, 3 | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 2 | Chemie (FES) | |||
| 49 | 3 | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
| 50 | 4, 6, A, H, J... | 1,2-Distearoyl-sn-glycerophosphoethanolamine | non-polymer | 748.1 | 10 | Chemie (3PE) | |||
| 51 | 6, 9, L, M | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE | non-polymer | 790.1 | 5 | Chemie (PC1) | |||
| 52 | b | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 53 | d | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 745.4 | 1 | Chemie (NDP) | |||
| 54 | j, X | S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate | non-polymer | 568.7 | 2 | Chemie (ZMP) | |||
| 55 | k | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 1 | Chemie (AMP) | |||
| 56 | s | MYRISTIC ACID | non-polymer | 228.4 | 1 | Chemie (MYR) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 45 |
| Total formula weight | 1048504.9 | |
| Non-Polymers* | Number of molecules | 32 |
| Total formula weight | 17577.6 | |
| All* | Total formula weight | 1066082.5 |
