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7Z9P

The novel DNA binding mechanism of ridinilazole, a precision Clostridiodes difficile antibiotic

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...
(A, B, C, D, E...)
DNA (5'-D(P*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G*(RID))-3')polymer123663.46synthetic construct
2G, O, P
(A, D, E)
Ridinilazolenon-polymer388.43Chemie (IK7)
3H, J, K, L, Q
(A, C, E)
SULFATE IONnon-polymer96.15Chemie (SO4)
4I
(A)
SODIUM IONnon-polymer23.01Chemie (NA)
5M, N, R
(C, F)
ZINC IONnon-polymer65.43Chemie (ZN)
6S, T, U, V, W...
(A, B, C, D, E...)
waterwater18.048Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight21980.4
Non-Polymers*Number of molecules12
Total formula weight1864.8
All*Total formula weight23845.2
*Water molecules are not included.

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PDB entries from 2026-03-25

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