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7Z76

Crystal structure of compound 10 in complex with the bromodomain of human SMARCA2 and pVHL:ElonginC:ElonginB

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AElongin-Bpolymer10411748.41UniProt (Q15370)
Pfam (PF00240)
In PDB
Homo sapiens (human)EloB,Elongin 18 kDa subunit,RNA polymerase II transcription factor SIII subunit B,SIII p18,Transcription elongation factor B polypeptide 2
2BElongin-Cpolymer9710974.61UniProt (Q15369)
Pfam (PF03931)
In PDB
Homo sapiens (human)EloC,Elongin 15 kDa subunit,RNA polymerase II transcription factor SIII subunit C,SIII p15,Transcription elongation factor B polypeptide 1
3Cvon Hippel-Lindau disease tumor suppressorpolymer16218702.31UniProt (P40337)
Pfam (PF01847)
Pfam (PF17211)
In PDB
Homo sapiens (human)Protein G7,pVHL
4DProbable global transcription activator SNF2L2polymer12314380.51UniProt (P51531)
Pfam (PF00439)
In PDB
Homo sapiens (human)ATP-dependent helicase SMARCA2,BRG1-associated factor 190B,BAF190B,Protein brahma homolog,hBRM,SNF2-alpha,SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2
5C, DIODIDE IONnon-polymer126.97Chemie (IOD)
6D(2~{S},4~{R})-~{N}-[(1~{R})-2-[(2~{R})-1-[4-(4-bromanyl-7-cyclopentyl-5-oxidanylidene-benzimidazolo[1,2-a]quinazolin-9-yl)piperidin-1-yl]propan-2-yl]oxy-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]-1-[(2~{S})-2-[[1-(dimethylamino)cyclopropyl]carbonylamino]-3,3-dimethyl-butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamidenon-polymer1077.21Chemie (IFJ)
7waterwater18.0672Chemie (HOH)
Sequence modifications
B: 17 - 112 (UniProt: Q15369)
PDBExternal DatabaseDetails
Met 16-initiating methionine
C: 54 - 213 (UniProt: P40337)
PDBExternal DatabaseDetails
Gly 52-expression tag
Ser 53-expression tag
D: 1373 - 1493 (UniProt: P51531)
PDBExternal DatabaseDetails
Ser 1371-expression tag
Met 1372-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight55805.9
Non-Polymers*Number of molecules8
Total formula weight1965.5
All*Total formula weight57771.4
*Water molecules are not included.

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PDB entries from 2024-04-24

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