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7Y7P

QDE-1 in complex with RNA template, RNA primer and AMPNPP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
RNA-dependent RNA polymerasepolymer1026117139.42UniProt (Q9Y7G6)
Pfam (PF05183)
Neurospora crassa
2C, E
(C, E)
RNA (5'-R(*GP*AP*A*CP*UP*AP*UP*GP*GP*UP*CP*GP*GP*A)-3')polymer144526.82synthetic construct
3D, F
(D, J)
RNA (5'-R(*UP*CP*CP*GP*AP*CP*C)-3')polymer72156.32synthetic construct
4G, H, I, M, N...
(A, B, C)
CALCIUM IONnon-polymer40.17Chemie (CA)
5J, P
(A, B)
5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosinenon-polymer506.22Chemie (ZAN)
6K
(B)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
7L
(B)
GLYCEROLnon-polymer92.11Chemie (GOL)
8R, S, T, U, V...
(A, B, C, D, E...)
waterwater18.0153Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight247644.9
Non-Polymers*Number of molecules11
Total formula weight1491.2
All*Total formula weight249136.1
*Water molecules are not included.

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PDB entries from 2025-12-24

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