7X91
The SARS-CoV-2 receptor binding domain bound with an Fv-clasp form of a human neutralizing antibody Ab496
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Spike glycoprotein | polymer | 1278 | 141459.5 | 1 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB | Severe acute respiratory syndrome coronavirus 2 | S glycoprotein,E2,Peplomer protein |
2 | H | An Fv-clasp version of the Ab496 heavy chain | polymer | 202 | 22867.6 | 1 | Homo sapiens | ||
3 | L | An Fv-clasp version of the Ab496 light chain | polymer | 190 | 21444.9 | 1 | Homo sapiens | ||
4 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) |
Sequence modifications
A: 1 - 1208 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Gly 682 | Arg 682 | engineered mutation |
Ser 683 | Arg 683 | engineered mutation |
Ser 685 | Arg 685 | engineered mutation |
Pro 817 | Phe 817 | engineered mutation |
Pro 892 | Ala 892 | engineered mutation |
Pro 899 | Ala 899 | engineered mutation |
Pro 942 | Ala 942 | engineered mutation |
Pro 986 | Lys 986 | engineered mutation |
Pro 987 | Val 987 | engineered mutation |
Ala 1209 | - | expression tag |
Ala 1210 | - | expression tag |
Ala 1211 | - | expression tag |
Gly 1212 | - | expression tag |
Ser 1213 | - | expression tag |
Gly 1214 | - | expression tag |
Tyr 1215 | - | expression tag |
Ile 1216 | - | expression tag |
Pro 1217 | - | expression tag |
Glu 1218 | - | expression tag |
Ala 1219 | - | expression tag |
Pro 1220 | - | expression tag |
Arg 1221 | - | expression tag |
Asp 1222 | - | expression tag |
Gly 1223 | - | expression tag |
Gln 1224 | - | expression tag |
Ala 1225 | - | expression tag |
Tyr 1226 | - | expression tag |
Val 1227 | - | expression tag |
Arg 1228 | - | expression tag |
Lys 1229 | - | expression tag |
Asp 1230 | - | expression tag |
Gly 1231 | - | expression tag |
Glu 1232 | - | expression tag |
Trp 1233 | - | expression tag |
Val 1234 | - | expression tag |
Leu 1235 | - | expression tag |
Leu 1236 | - | expression tag |
Ser 1237 | - | expression tag |
Thr 1238 | - | expression tag |
Phe 1239 | - | expression tag |
Leu 1240 | - | expression tag |
Gly 1241 | - | expression tag |
Ser 1242 | - | expression tag |
Ser 1243 | - | expression tag |
Gly 1244 | - | expression tag |
Arg 1245 | - | expression tag |
Glu 1246 | - | expression tag |
Asn 1247 | - | expression tag |
Leu 1248 | - | expression tag |
Tyr 1249 | - | expression tag |
Phe 1250 | - | expression tag |
Gln 1251 | - | expression tag |
Gly 1252 | - | expression tag |
Gly 1253 | - | expression tag |
Gly 1254 | - | expression tag |
Gly 1255 | - | expression tag |
Ser 1256 | - | expression tag |
Gly 1257 | - | expression tag |
Leu 1258 | - | expression tag |
Asn 1259 | - | expression tag |
Asp 1260 | - | expression tag |
Ile 1261 | - | expression tag |
Phe 1262 | - | expression tag |
Glu 1263 | - | expression tag |
Ala 1264 | - | expression tag |
Gln 1265 | - | expression tag |
Lys 1266 | - | expression tag |
Ile 1267 | - | expression tag |
Glu 1268 | - | expression tag |
Trp 1269 | - | expression tag |
His 1270 | - | expression tag |
Glu 1271 | - | expression tag |
Gly 1272 | - | expression tag |
His 1273 | - | expression tag |
His 1274 | - | expression tag |
His 1275 | - | expression tag |
His 1276 | - | expression tag |
His 1277 | - | expression tag |
His 1278 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 185771.9 | |
Branched | Number of molecules | 1 |
Total formula weight | 424.4 | |
All* | Total formula weight | 186196.3 |