7X8K
Arabidopsis GDP-D-mannose pyrophosphorylase (VTC1) structure (product-bound)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Mannose-1-phosphate guanylyltransferase 1 | polymer | 376 | 41340.1 | 4 | UniProt (O22287) Pfam (PF00483) Pfam (PF00132) In PDB | Arabidopsis thaliana (thale cress) | GDP-mannose pyrophosphorylase 1,Protein CYTOKINESIS DEFECTIVE 1,Protein EMBRYO DEFECTIVE 101,Protein HYPERSENSITIVE TO AMMONIUM ION 1,Protein SENSITIVE TO OZONE 1,Protein VITAMIN C DEFECTIVE 1 |
2 | A | GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE | non-polymer | 605.3 | 1 | Chemie (GDD) | |||
3 | A, C | CITRATE ANION | non-polymer | 189.1 | 2 | Chemie (FLC) | |||
4 | D, A, B, C | SULFATE ION | non-polymer | 96.1 | 19 | Chemie (SO4) | |||
5 | D, B | PYROPHOSPHATE | non-polymer | 178.0 | 2 | Chemie (PPV) | |||
6 | water | water | 18.0 | 11 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 361 (UniProt: O22287)
PDB | External Database | Details |
---|---|---|
Met -1 | - | initiating methionine |
Gly 0 | - | expression tag |
Lys 362 | - | expression tag |
Leu 363 | - | expression tag |
Ala 364 | - | expression tag |
Ala 365 | - | expression tag |
Ala 366 | - | expression tag |
Leu 367 | - | expression tag |
Glu 368 | - | expression tag |
His 369 | - | expression tag |
His 370 | - | expression tag |
His 371 | - | expression tag |
His 372 | - | expression tag |
His 373 | - | expression tag |
His 374 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 165360.6 | |
Non-Polymers* | Number of molecules | 24 |
Total formula weight | 3164.7 | |
All* | Total formula weight | 168525.3 |