7WRZ

Local resolution of BD55-5840 Fab and SARS-COV2 Omicron RBD

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	H	BD55-5840H	polymer	119	13136.4	1		SARS coronavirus B012
2	L	BD55-5840L	polymer	109	11636.0	1		SARS coronavirus B012
3	R	Spike protein S1	polymer	193	21983.9	1	UniProt (P0DTC2) Pfam (PF09408) In PDB	SARS coronavirus B012	Omicron RBD
4	C	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	1	In PDB GlyTouCan (G42666HT)

Sequence modifications

R: 335 - 527 (UniProt: P0DTC2)

PDB	External Database	Details
Asp 339	Gly 339	variant
Leu 371	Ser 371	variant
Pro 373	Ser 373	variant
Phe 375	Ser 375	variant
Asn 417	Lys 417	variant
Lys 440	Asn 440	variant
Ser 446	Gly 446	variant
Asn 477	Ser 477	variant
Lys 478	Thr 478	variant
Ala 484	Glu 484	variant
Arg 493	Gln 493	variant
Ser 496	Gly 496	variant
Arg 498	Gln 498	variant
Tyr 501	Asn 501	variant
His 505	Tyr 505	variant
Lys 527	Pro 527	variant

Contents of the asymmetric unit

Polymers	Number of chains	3
	Total formula weight	46756.2
Branched	Number of molecules	1
	Total formula weight	424.4
All*	Total formula weight	47180.6

*Water molecules are not included.