7VPH
Crystal structure of the C-terminal tail of SARS-CoV-2 Orf6 complex with human nucleoporin pair Rae1-Nup98
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E, G | mRNA export factor | polymer | 378 | 42398.5 | 4 | UniProt (P78406) Pfam (PF00400) In PDB | Homo sapiens (human) | Rae1 protein homolog,mRNA-associated protein mrnp 41 |
2 | B, D, F, H | Isoform 3 of Nuclear pore complex protein Nup98-Nup96 | polymer | 67 | 7785.7 | 4 | UniProt (P52948) Pfam (PF21240) In PDB | Homo sapiens (human) | |
3 | I, J, K, X | ORF6 protein | polymer | 21 | 2486.7 | 4 | UniProt (P0DTC6) Pfam (PF12133) In PDB | Severe acute respiratory syndrome coronavirus 2 | ORF6,Accessory protein 6,Non-structural protein 6,ns6,Protein X3 |
4 | water | water | 18.0 | 56 | Chemie (HOH) |
Sequence modifications
A, C, E, G: 1 - 368 (UniProt: P78406)
B, D, F, H: 158 - 213 (UniProt: P52948)
PDB | External Database | Details |
---|---|---|
His 369 | - | expression tag |
His 370 | - | expression tag |
His 371 | - | expression tag |
His 372 | - | expression tag |
His 373 | - | expression tag |
His 374 | - | expression tag |
His 375 | - | expression tag |
His 376 | - | expression tag |
His 377 | - | expression tag |
His 378 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 147 | - | initiating methionine |
His 148 | - | expression tag |
His 149 | - | expression tag |
His 150 | - | expression tag |
His 151 | - | expression tag |
His 152 | - | expression tag |
His 153 | - | expression tag |
His 154 | - | expression tag |
His 155 | - | expression tag |
His 156 | - | expression tag |
His 157 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 210683.7 | |
All* | Total formula weight | 210683.7 |