7VN9
Crystal structure of human coronavirus 229E spike protein receptor-binding domain in complex with C04 Fab
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | H, A | C04 Fab heavy chain | polymer | 231 | 24304.1 | 2 | Homo sapiens (human) | ||
| 2 | L, B | C04 Fab light chain | polymer | 215 | 23343.9 | 2 | Homo sapiens (human) | ||
| 3 | E, C | Spike glycoprotein S1 | polymer | 148 | 16194.3 | 2 | UniProt (P15423) Pfam (PF01600) In PDB | Human coronavirus 229E (HCoV-229E) | S glycoprotein,E2,Peplomer protein |
| 4 | D, G | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
| 5 | F | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 6 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) |
Sequence modifications
E, C: 294 - 435 (UniProt: P15423)
| PDB | External Database | Details |
|---|---|---|
| Glu 436 | - | expression tag |
| Asn 437 | - | expression tag |
| Leu 438 | - | expression tag |
| Tyr 439 | - | expression tag |
| Phe 440 | - | expression tag |
| Gln 441 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 127684.6 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 1597.5 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 221.2 | |
| All* | Total formula weight | 129503.3 |
