7T7M
Structure of human GLP SET-domain (EHMT1) in complex with covalent inhibitor (Compound 1)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D | Histone-lysine N-methyltransferase EHMT1 | polymer | 287 | 32974.3 | 4 | UniProt (Q9H9B1) Pfam (PF05033) Pfam (PF00856) In PDB | Homo sapiens (human) | Euchromatic histone-lysine N-methyltransferase 1,Eu-HMTase1,G9a-like protein 1,GLP1,Histone H3-K9 methyltransferase 5,H3-K9-HMTase 5,Lysine N-methyltransferase 1D |
| 2 | A, B, C, D | ZINC ION | non-polymer | 65.4 | 16 | Chemie (ZN) | |||
| 3 | A, B, C | N-(6-methoxy-4-{[1-(propan-2-yl)piperidin-4-yl]amino}-7-[3-(pyrrolidin-1-yl)propoxy]quinazolin-2-yl)prop-2-enamide | non-polymer | 496.6 | 3 | Chemie (G4R) | |||
| 4 | D | N-(6-methoxy-4-{[1-(propan-2-yl)piperidin-4-yl]amino}-7-[3-(pyrrolidin-1-yl)propoxy]quinazolin-2-yl)propanamide | non-polymer | 498.7 | 1 | Chemie (G5U) | |||
| 5 | water | water | 18.0 | 46 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 982 - 1266 (UniProt: Q9H9B1)
| PDB | External Database | Details |
|---|---|---|
| Gly 980 | - | expression tag |
| Ser 981 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 131897.4 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 3035.1 | |
| All* | Total formula weight | 134932.5 |
