7T6I
Crystal structure of HLA-DP1 in complex with pp65 peptide in reverse orientation
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | HLA class II histocompatibility antigen DP alpha chain | polymer | 183 | 21020.3 | 1 | UniProt (Q95HB9) | Homo sapiens (human) | HLA-DPA1 protein,HLA-DPA1*02:01:01:NEW,MHC class II antigen |
| 2 | B (B) | MHC class II antigen | polymer | 191 | 22173.7 | 1 | UniProt (S6B6U4) | Homo sapiens (human) | |
| 3 | C (C) | pp65 peptide | polymer | 17 | 1853.1 | 1 | UniProt (P06725) | Human cytomegalovirus (strain AD169) | pp65,65 kDa matrix phosphoprotein,Phosphoprotein UL83,Tegument protein UL83 |
| 4 | D, E, G (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
| 5 | F (A) | GLYCINE | non-polymer | 75.1 | 1 | Chemie (GLY) PubChem (750) | |||
| 6 | H (B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 7 | I, J, K (A, B, C) | water | water | 18.0 | 191 | Chemie (HOH) |
Sequence modifications
A: 1 - 180 (UniProt: Q95HB9)
B: 1 - 188 (UniProt: S6B6U4)
| PDB | External Database | Details |
|---|---|---|
| Thr 181 | - | expression tag |
| Ser 182 | - | expression tag |
| Gly 183 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Thr 189 | - | expression tag |
| Gly 190 | - | expression tag |
| Gly 191 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 45047.2 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 800.8 | |
| All* | Total formula weight | 45848.0 |
