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7SGM

Crystal structure of a Fab variant containing a fluorescent noncanonical amino acid with blocked excited state proton transfer and in complex with its antigen, CD40L

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
CD40 ligandpolymer14615812.83UniProt (P29965)
Pfam (PF00229)
Homo sapiens (Human)CD40-L,T-cell antigen Gp39,TNF-related activation protein,TRAP,Tumor necrosis factor ligand superfamily member 5
2D, F, H
(H, K, X)
5c8* Fab heavy chainpolymer22624005.83Homo sapiens
3E, G, I
(L, M, Y)
5c8* Fab light chainpolymer21824013.63Homo sapiens
4J, M, O
(A, B, C)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
5K
(A)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.11Chemie (TRS)
6BA, CA, L, N, P...
(Y, A, B, C, H...)
DI(HYDROXYETHYL)ETHERnon-polymer106.113Chemie (PEG)
7AA, S, X
(Y, L, M)
trimethylamine oxidenon-polymer75.13Chemie (TMO)
8DA, EA, FA, GA, HA...
(A, B, C, H, L...)
waterwater18.01276Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains9
Total formula weight191496.7
Non-Polymers*Number of molecules20
Total formula weight2390.7
All*Total formula weight193887.3
*Water molecules are not included.

239149

PDB entries from 2025-07-23

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