7SFD
Human DNMT1(729-1600) Bound to Zebularine-Containing 12mer dsDNA and Inhibitor GSK3543105A
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | DNA (cytosine-5)-methyltransferase 1 | polymer | 874 | 98803.6 | 1 | UniProt (P26358) Pfam (PF01426) Pfam (PF00145) In PDB | Homo sapiens (human) | Dnmt1,CXXC-type zinc finger protein 9,DNA methyltransferase HsaI,M.HsaI,MCMT |
| 2 | C | DNA (12-MER) | polymer | 12 | 3678.4 | 1 | Homo sapiens | ||
| 3 | D | DNA (12-MER) | polymer | 12 | 3665.4 | 1 | Homo sapiens | ||
| 4 | A | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 1 | Chemie (SAH) | |||
| 5 | A | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 6 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
| 7 | A | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 8 | C | (2S)-2-({3,5-dicyano-4-ethyl-6-[4-(2-hydroxyethyl)-1,4-diazepan-1-yl]pyridin-2-yl}sulfanyl)-2-phenylacetamide | non-polymer | 464.6 | 1 | Chemie (IO5) | |||
| 9 | water | water | 18.0 | 251 | Chemie (HOH) |
Sequence modifications
A: 729 - 1600 (UniProt: P26358)
| PDB | External Database | Details |
|---|---|---|
| His 727 | - | expression tag |
| Met 728 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 106147.3 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1350.2 | |
| All* | Total formula weight | 107497.5 |
