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7S6C

CryoEM structure of modular PKS holo-Lsd14 stalled at the condensation step and bound to antibody fragment 1B2, composite structure

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D6-deoxyerythronolide-B synthase EryA2, modules 3 and 4, Lsd14 Polyketide synthase fusionpolymer1649174085.74UniProt (Q03132)
UniProt (B6ZK67)
Pfam (PF08990)
Pfam (PF00109)
Pfam (PF02801)
Pfam (PF16197)
Pfam (PF00698)
Pfam (PF18369)
Pfam (PF08659)
Pfam (PF00550)
In PDB
Saccharopolyspora erythraeaDEBS 2,6-deoxyerythronolide B synthase II,Erythronolide synthase,ORF B
2E, HFab 1B2 heavy chainpolymer24926447.62Homo sapiens (Human)
3F, GFab 1B2 light chainpolymer23625715.82Homo sapiens (Human)
4C2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATEnon-polymer507.21Chemie (ATR)
5D4'-PHOSPHOPANTETHEINEnon-polymer358.31Chemie (PNS)
Sequence modifications
A, B, C, D: 9 - 37 (UniProt: Q03132)
PDBExternal DatabaseDetails
Met 7-initiating methionine
Val 8-expression tag
A, B, C, D: 38 - 1647 (UniProt: B6ZK67)
PDBExternal DatabaseDetails
Leu 1648-expression tag
Glu 1649-expression tag
His 1650-expression tag
His 1651-expression tag
His 1652-expression tag
His 1653-expression tag
His 1654-expression tag
His 1655-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight800669.8
Non-Polymers*Number of molecules2
Total formula weight865.5
All*Total formula weight801535.4
*Water molecules are not included.

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PDB entries from 2024-07-10

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