7S0S
M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | 3 | ribosomal protein bL37 | polymer | 23 | 2710.2 | 1 | UniProt (A0QTP4) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
2 | B | 16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA | polymer | 284 | 29898.2 | 1 | UniProt (A0A045KH60) Pfam (PF01479) Pfam (PF01728) UniProt (by SIFTS) (P9WJ63) In PDB | Mycobacterium tuberculosis | Cytotoxin / haemolysin homologue TlyA,Mutant TlyA |
3 | C | 23S rRNA | polymer | 3120 | 1012532.4 | 1 | GenBank (CP009494.1) | Mycolicibacterium smegmatis | |
4 | D | 50S ribosomal protein L2 | polymer | 275 | 30008.4 | 1 | UniProt (A0A0D6H9F9) Pfam (PF00181) Pfam (PF03947) UniProt (by SIFTS) (A0QSD4) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
5 | E | 50S ribosomal protein L3 | polymer | 214 | 22621.9 | 1 | UniProt (A0A0D6H852) Pfam (PF00297) UniProt (by SIFTS) (A0QSD1) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
6 | F | 50S ribosomal protein L4 | polymer | 210 | 22477.5 | 1 | UniProt (A0A0D6H7R4) Pfam (PF00573) UniProt (by SIFTS) (A0QSD2) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
7 | G | 50S ribosomal protein L5 | polymer | 182 | 20588.7 | 1 | UniProt (A0A0D6HA71) Pfam (PF00281) Pfam (PF00673) UniProt (by SIFTS) (A0QSG1) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
8 | H | 50S ribosomal protein L6 | polymer | 176 | 19165.9 | 1 | UniProt (A0A0D6H902) Pfam (PF00347) UniProt (by SIFTS) (A0QSG4) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
9 | I | 50S ribosomal protein L9 | polymer | 151 | 15949.3 | 1 | UniProt (A0A653F9J9) Pfam (PF01281) Pfam (PF03948) UniProt (by SIFTS) (A0R7F6) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
10 | J | 50S ribosomal protein L10 | polymer | 126 | 13095.0 | 1 | UniProt (A0A0D6H7F9) Pfam (PF00466) UniProt (by SIFTS) (A0QS62) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
11 | K | 50S ribosomal protein L11 | polymer | 133 | 14109.2 | 1 | UniProt (A0A0D6H7I7) Pfam (PF03946) Pfam (PF00298) UniProt (by SIFTS) (A0QS45) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
12 | L | 50S ribosomal protein L13 | polymer | 146 | 16015.5 | 1 | UniProt (A0A653FEZ4) Pfam (PF00572) UniProt (by SIFTS) (A0QSP8) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
13 | M | 50S ribosomal protein L14 | polymer | 122 | 13400.6 | 1 | UniProt (A0A0D6HA57) Pfam (PF00238) UniProt (by SIFTS) (A0QSF9) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
14 | N | 50S ribosomal protein L15 | polymer | 145 | 15384.0 | 1 | UniProt (A0A653FF82) Pfam (PF00828) UniProt (by SIFTS) (A0QSG8) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
15 | O | 50S ribosomal protein L16 | polymer | 136 | 15498.9 | 1 | UniProt (A0A0D6H8A3) Pfam (PF00252) UniProt (by SIFTS) (A0QSD8) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
16 | P | 50S ribosomal protein L17 | polymer | 118 | 13210.3 | 1 | UniProt (A0A0D6HA74) Pfam (PF01196) UniProt (by SIFTS) (A0QSL9) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
17 | Q | 50S ribosomal protein L18 | polymer | 126 | 13580.5 | 1 | UniProt (A0A0D6HAD5) Pfam (PF00861) UniProt (by SIFTS) (A0QSG5) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
18 | R | 50S ribosomal protein L19 | polymer | 113 | 12892.8 | 1 | UniProt (A0A0D6HUB6) Pfam (PF01245) UniProt (by SIFTS) (A0QV42) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
19 | S | 50S ribosomal protein L20 | polymer | 124 | 14035.2 | 1 | UniProt (A0A0D6IFR3) Pfam (PF00453) UniProt (by SIFTS) (A0QYU6) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
20 | T | 50S ribosomal protein L21 | polymer | 100 | 10724.4 | 1 | UniProt (A0A0D6IQ37) Pfam (PF00829) UniProt (by SIFTS) (A0R151) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
21 | U | 50S ribosomal protein L22 | polymer | 114 | 12408.2 | 1 | UniProt (O06115) Pfam (PF00237) UniProt (by SIFTS) (A0QSD6) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
22 | V | 50S ribosomal protein L23 | polymer | 97 | 10748.4 | 1 | UniProt (A0A0D6H9F4) Pfam (PF00276) UniProt (by SIFTS) (A0QSD3) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
23 | W | 50S ribosomal protein L24 | polymer | 105 | 11228.9 | 1 | UniProt (A0A0D6HA97) Pfam (PF00467) Pfam (PF17136) UniProt (by SIFTS) (A0QSG0) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
24 | X | 50S ribosomal protein L25 | polymer | 192 | 20331.7 | 1 | UniProt (A0A0D6IY62) Pfam (PF01386) Pfam (PF14693) UniProt (by SIFTS) (A0R3D2) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | General stress protein CTC |
25 | Y | 50S ribosomal protein L27 | polymer | 79 | 8322.5 | 1 | UniProt (A0A0D6IQ33) Pfam (PF01016) UniProt (by SIFTS) (A0R150) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
26 | Z | 50S ribosomal protein L28 | polymer | 63 | 6759.8 | 1 | UniProt (A0A0D6HVA7) Pfam (PF00830) UniProt (by SIFTS) (A0QV03) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
27 | a | 50S ribosomal protein L29 | polymer | 64 | 7590.6 | 1 | UniProt (A0A0D6H9R7) Pfam (PF00831) UniProt (by SIFTS) (A0QSD9) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
28 | b | 50S ribosomal protein L30 | polymer | 59 | 6761.8 | 1 | UniProt (A0A0D6HAE9) Pfam (PF00327) UniProt (by SIFTS) (A0QSG7) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
29 | c | 50S ribosomal protein L32 | polymer | 54 | 6050.1 | 1 | UniProt (A0A0D6IYP7) Pfam (PF01783) UniProt (by SIFTS) (A0R3I9) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
30 | d | 50S ribosomal protein L33 | polymer | 49 | 5833.8 | 1 | UniProt (A0A0D6H541) Pfam (PF00471) UniProt (by SIFTS) (A0QS39) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
31 | e | 50S ribosomal protein L34 | polymer | 46 | 5391.4 | 1 | UniProt (P0C562) Pfam (PF00468) UniProt (by SIFTS) (A0R7K0) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
32 | f | 50S ribosomal protein L35 | polymer | 63 | 7167.3 | 1 | UniProt (A0A0D6IFR9) Pfam (PF01632) UniProt (by SIFTS) (A0QYU7) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
33 | g | 50S ribosomal protein L36 | polymer | 37 | 4341.3 | 1 | UniProt (A0QSL4) Pfam (PF00444) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
34 | h | 50S ribosomal protein L31 | polymer | 48 | 5258.0 | 1 | UniProt (A0A0D6IUC0) Pfam (PF01197) UniProt (by SIFTS) (A0R215) In PDB | Mycolicibacterium smegmatis (Mycobacterium smegmatis) | |
35 | i | 5S rRNA | polymer | 118 | 38061.8 | 1 | GenBank (967054) | Mycolicibacterium smegmatis | |
36 | C, D, E, N, O... | MAGNESIUM ION | non-polymer | 24.3 | 402 | Chemie (MG) | |||
37 | Z, d, g, h | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) |
Sequence modifications
B: 1 - 268 (UniProt: A0A045KH60)
PDB | External Database | Details |
---|---|---|
Met -15 | - | initiating methionine |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
His -9 | - | expression tag |
Ala -8 | - | expression tag |
Ser -7 | - | expression tag |
Gly -6 | - | expression tag |
Leu -5 | - | expression tag |
Val -4 | - | expression tag |
Pro -3 | - | expression tag |
Arg -2 | - | expression tag |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 35 |
Total formula weight | 1484154.6 | |
Non-Polymers* | Number of molecules | 406 |
Total formula weight | 10032.2 | |
All* | Total formula weight | 1494186.8 |