7RMA
Structure of the fourth UIM (Ubiquitin Interacting Motif) of ANKRD13D in complex with a high affinity UbV (Ubiquitin Variant)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Ubiquitin Variant | polymer | 88 | 9849.2 | 1 | UniProt (P0CG47) Pfam (PF00240) | Homo sapiens (Human) | |
| 2 | B (C) | Ankyrin repeat domain-containing protein 13D | polymer | 20 | 2425.6 | 1 | UniProt (Q6ZTN6) | Homo sapiens | |
| 3 | C (C) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 4 | D (C) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 5 | E, F (A, C) | water | water | 18.0 | 17 | Chemie (HOH) |
Sequence modifications
A: 1 - 79 (UniProt: P0CG47)
| PDB | External Database | Details |
|---|---|---|
| Gly -5 | - | expression tag |
| Ala -4 | - | expression tag |
| Ala -3 | - | expression tag |
| Gln -2 | - | expression tag |
| Pro -1 | - | expression tag |
| Ala 0 | - | expression tag |
| Arg 6 | Lys 6 | variant |
| His 8 | Leu 8 | variant |
| Ala 9 | Thr 9 | variant |
| Met 10 | Gly 10 | variant |
| Arg 11 | Lys 11 | variant |
| Asp 13 | Ile 13 | variant |
| Val 14 | Thr 14 | variant |
| Arg 62 | Gln 62 | variant |
| Gln 63 | Lys 63 | variant |
| Ile 66 | Thr 66 | variant |
| Leu 70 | Val 70 | variant |
| Trp 72 | Arg 72 | variant |
| Pro 73 | Leu 73 | variant |
| Ser 75 | Gly 75 | variant |
| Leu 76 | Gly 76 | variant |
| Arg 77 | Met 77 | variant |
| Ala 78 | Gln 78 | variant |
| Gly 79 | Ile 79 | variant |
| Ala 80 | - | cloning artifact |
| Ala 81 | - | cloning artifact |
| Ala 82 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 12274.8 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 119.1 | |
| All* | Total formula weight | 12393.9 |
