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7R6K

State E2 nucleolar 60S ribosomal intermediate - Model for Noc2/Noc3 region

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(1)
25S rRNApolymer15249285.21Saccharomyces cerevisiae BY4741
2B
(7)
60S ribosomal subunit assembly/export protein LOC1polymer20423652.61UniProt (P43586)Saccharomyces cerevisiae BY4741Localization of ASH1 mRNA protein 1
3C
(8)
Nucleolar complex protein 2polymer71081719.31UniProt (P39744)
Pfam (PF03715)
Saccharomyces cerevisiae BY4741
4D
(A)
Ribosome biogenesis protein BRX1polymer29133585.41UniProt (Q08235)
Pfam (PF04427)
Saccharomyces cerevisiae BY4741
5E
(G)
60S ribosomal protein L8-Apolymer25628175.81UniProt (P17076)
Pfam (PF01248)
Saccharomyces cerevisiae BY4741L4,L4-2,L7a-1,Large ribosomal subunit protein eL8-A,Maintenance of killer protein 7,RP6,YL5
6F
(I)
Nucleolar complex-associated protein 3polymer66375689.01UniProt (Q07896)
Pfam (PF07540)
Pfam (PF03914)
Saccharomyces cerevisiae BY4741
7G
(J)
rRNA-processing protein EBP2polymer42749842.61UniProt (P36049)
Pfam (PF05890)
Saccharomyces cerevisiae BY4741EBNA1-binding protein homolog
8H
(N)
60S ribosomal protein L15-Apolymer20424482.41UniProt (P05748)
Pfam (PF00827)
Saccharomyces cerevisiae BY4741L13,Large ribosomal subunit protein eL15-A,RP15R,YL10,YP18
9I
(g)
60S ribosomal protein L34-Apolymer12113673.21UniProt (P87262)
Pfam (PF01199)
Saccharomyces cerevisiae BY4741Large ribosomal subunit protein eL34-A
10J
(i)
60S ribosomal protein L36-Apolymer10011151.31UniProt (P05745)
Pfam (PF01158)
Saccharomyces cerevisiae BY4741L39,Large ribosomal subunit protein eL36-A,YL39
11K
(l)
60S ribosome subunit biogenesis protein NIP7polymer18120411.71UniProt (Q08962)
Pfam (PF17833)
Pfam (PF03657)
Saccharomyces cerevisiae BY4741Nuclear import protein 7
12L
(m)
Ribosome biogenesis protein ERB1polymer80791830.61UniProt (Q04660)
Pfam (PF08145)
Pfam (PF00400)
Saccharomyces cerevisiae BY4741Eukaryotic ribosome biogenesis protein 1
13M
(q)
25S rRNA (cytosine(2870)-C(5))-methyltransferasepolymer61869912.21UniProt (P40991)
Pfam (PF01189)
Saccharomyces cerevisiae BY4741Nucleolar protein 2
14N
(r)
Ribosome biogenesis protein NSA2polymer26129786.81UniProt (A6ZR80)
Pfam (PF01201)
UniProt (by SIFTS) (P40078)
Saccharomyces cerevisiae BY4741NOP7-associated protein 2
15O
(w)
27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferasepolymer84196656.21UniProt (P25582)
Pfam (PF01728)
Pfam (PF11861)
Pfam (PF07780)
Saccharomyces cerevisiae BY47412'-O-ribose RNA methyltransferase SPB1,AdoMet-dependent rRNA methyltransferase SPB1,S-adenosyl-L-methionine-dependent methyltransferase,Suppressor of PAB1 protein 1
16P
(5)
RRP17 isoform 1polymer81082.21UniProt (A0A6A5Q2X9)
UniProt (by SIFTS) (Q04031)
Saccharomyces cerevisiae BY4741
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains16
Total formula weight700936.5
All*Total formula weight700936.5
*Water molecules are not included.

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PDB entries from 2025-06-11

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