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7R1T

Crystal structure of SARS-CoV-2 nsp10/nsp16 in complex with the SS148 inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A2'-O-methyltransferase nsp16polymer29933486.41UniProt (P0DTD1)
Pfam (PF06460)
In PDB
Severe acute respiratory syndrome coronavirus 2Non-structural protein 16,nsp16
2BNon-structural protein 10polymer12313126.11UniProt (P0DTD1)
Pfam (PF09401)
In PDB
Severe acute respiratory syndrome coronavirus 2nsp10,Growth factor-like peptide,GFL
3A(2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-(4-azanyl-5-cyano-pyrrolo[2,3-d]pyrimidin-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acidnon-polymer408.41Chemie (6NR)
4APHOSPHATE IONnon-polymer95.02Chemie (PO4)
5A2-(N-MORPHOLINO)-ETHANESULFONIC ACIDnon-polymer195.21Chemie (MES)
6BZINC IONnon-polymer65.42Chemie (ZN)
7waterwater18.026Chemie (HOH)
Sequence modifications
A: 1 - 298 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Met 0-initiating methionine
B: 10 - 131 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Met 9-initiating methionine
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight46612.5
Non-Polymers*Number of molecules6
Total formula weight924.4
All*Total formula weight47536.9
*Water molecules are not included.

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PDB entries from 2024-05-15

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