7QU1
Machupo virus GP1 glycoprotein in complex with Fab fragment of antibody MAC1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Fab MAC1 heavy chain | polymer | 234 | 25234.1 | 1 | Mus musculus | ||
2 | B | Fab MAC1 light chain | polymer | 217 | 24090.6 | 1 | Mus musculus | ||
3 | C | Pre-glycoprotein polyprotein GP complex | polymer | 182 | 21050.9 | 1 | UniProt (Q6PXP4) Pfam (PF00798) In PDB | Machupo mammarenavirus | Pre-GP-C |
4 | D | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1559.4 | 1 | In PDB GlyTouCan (G83161QT) | |||
5 | A, B | GLYCEROL | non-polymer | 92.1 | 10 | Chemie (GOL) | |||
6 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
7 | water | water | 18.0 | 358 | Chemie (HOH) |
Sequence modifications
C: 87 - 257 (UniProt: Q6PXP4)
PDB | External Database | Details |
---|---|---|
Gly 258 | - | expression tag |
Thr 259 | - | expression tag |
Gly 260 | - | expression tag |
Thr 261 | - | expression tag |
Lys 262 | - | expression tag |
His 263 | - | expression tag |
His 264 | - | expression tag |
His 265 | - | expression tag |
His 266 | - | expression tag |
His 267 | - | expression tag |
His 268 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 70375.6 | |
Branched | Number of molecules | 1 |
Total formula weight | 1559.4 | |
Non-Polymers* | Number of molecules | 13 |
Total formula weight | 1584.6 | |
All* | Total formula weight | 73519.5 |