7QF0
Crystal structure of the SARS-CoV-2 RBD in complex with the human antibody CV2.2325
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Spike protein S1 | polymer | 206 | 23068.7 | 1 | UniProt (P0DTC2) Pfam (PF09408) In PDB | Severe acute respiratory syndrome coronavirus 2 | |
2 | H | CV2.2325 heavy chain | polymer | 229 | 24483.3 | 1 | Homo sapiens (Human) | ||
3 | L | CV2.2325 light chain | polymer | 214 | 23394.0 | 1 | Homo sapiens (Human) | ||
4 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
5 | A | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
6 | H, L | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) | |||
7 | water | water | 18.0 | 234 | Chemie (HOH) |
Sequence modifications
A: 331 - 528 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Phe 367 | Val 367 | variant |
Gly 529 | - | expression tag |
Ser 530 | - | expression tag |
Gly 531 | - | expression tag |
Asp 532 | - | expression tag |
Asp 533 | - | expression tag |
Asp 534 | - | expression tag |
Asp 535 | - | expression tag |
Lys 536 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 70946.0 | |
Branched | Number of molecules | 1 |
Total formula weight | 424.4 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 129.3 | |
All* | Total formula weight | 71499.7 |