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7QF0

Crystal structure of the SARS-CoV-2 RBD in complex with the human antibody CV2.2325

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]77
Detector technologyPIXEL
Collection date2020-06-07
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9778
Spacegroup nameC 2 2 21
Unit cell lengths84.565, 148.875, 145.093
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.800 - 2.300
R-factor0.1867
Rwork0.185
R-free0.22130
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6m0j 5i1e
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.36048.3602.380
High resolution limit [Å]2.3008.9102.300
Rmerge0.1470.0401.188
Rmeas0.1530.0421.236
Rpim0.0410.0120.337
Total number of observations560786935952704
Number of reflections409727923971
<I/σ(I)>17.447.82.4
Completeness [%]99.999.399.7
Redundancy13.711.813.3
CC(1/2)0.9980.9990.769
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72960.1 M ammonium citrate (pH 7.0), 12% PEG 3350,

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PDB entries from 2024-07-31

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