7POL
Crystal structure of profragilysin-3 (proBFT-3) from Bacteroides fragilis in complex with flumequine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | BFT-3 | polymer | 402 | 45139.3 | 2 | UniProt (O86049) Pfam (PF16376) Pfam (PF13583) | Bacteroides fragilis | Metalloprotease,Metalloprotease enterotoxin |
| 2 | C (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 3 | D, E, M, N (A, B) | (12~{R})-7-fluoranyl-12-methyl-4-oxidanylidene-1-azatricyclo[7.3.1.0^{5,13}]trideca-2,5(13),6,8-tetraene-3-carboxylic acid | non-polymer | 261.2 | 4 | Chemie (7X9) | |||
| 4 | F, G (A) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 5 | H, I, J, O (A, B) | PROLINE | non-polymer | 115.1 | 4 | Chemie (PRO) | |||
| 6 | K, L, P, Q, R... (A, B) | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 6 | Chemie (DMS) | |||
| 7 | T, U (A, B) | water | water | 18.0 | 591 | Chemie (HOH) |
Sequence modifications
A, B: 18 - 397 (UniProt: O86049)
| PDB | External Database | Details |
|---|---|---|
| Met -4 | - | initiating methionine |
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
| His 1 | - | expression tag |
| His 2 | - | expression tag |
| His 3 | - | expression tag |
| His 4 | - | expression tag |
| His 5 | - | expression tag |
| Ser 6 | - | expression tag |
| Ser 7 | - | expression tag |
| Gly 8 | - | expression tag |
| Glu 9 | - | expression tag |
| Asn 10 | - | expression tag |
| Leu 11 | - | expression tag |
| Tyr 12 | - | expression tag |
| Phe 13 | - | expression tag |
| Gln 14 | - | expression tag |
| Gly 15 | - | expression tag |
| Ala 16 | - | expression tag |
| Met 17 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 90278.6 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 2110.6 | |
| All* | Total formula weight | 92389.2 |






