7PIN

Stacked compact Dunaliella PSII

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, XB, YA, Z (A, a, A1, a1)	Photosystem II protein D1	polymer	336	37291.5	4	UniProt (D0FY08) Pfam (PF00124)	Dunaliella salina	PSII D1 protein,Photosystem II Q(B) protein
2	AA, B, YB, ZA (B, b, B1, b1)	Photosystem II CP47 reaction center protein	polymer	484	53289.5	4	UniProt (A0A1C8XRM6) Pfam (PF00421)	Dunaliella salina	PSII 47 kDa protein,Protein CP-47
3	AB, BA, C, ZB (V, v, V1, v1)	Photosystem II reaction center protein Ycf12	polymer	32	3217.9	4	UniProt (D0FY13) Pfam (PF05969)	Dunaliella salina
4	AC, BB, CA, D (C, c, C1, c1)	Photosystem II CP43 reaction center protein	polymer	449	49129.0	4	UniProt (D0FXY3) Pfam (PF00421)	Dunaliella salina	PSII 43 kDa protein,Protein CP-43
5	BC, CB, DA, E (D, d, D1, d1)	Photosystem II D2 protein	polymer	348	38965.4	4	UniProt (A0A1C8XRK9) Pfam (PF00124)	Dunaliella salina	PSII D2 protein,Photosystem Q(A) protein
6	CC, DB, EA, F (E, e, E1, e1)	Cytochrome b559 subunit alpha	polymer	76	8743.8	4	UniProt (D0FY01) Pfam (PF00283) Pfam (PF00284)	Dunaliella salina	PSII reaction center subunit V
7	DC, EB, FA, G (F, f, F1, f1)	Cytochrome b559 subunit beta	polymer	31	3549.3	4	UniProt (A0A1C8XRP4) Pfam (PF00283)	Dunaliella salina	PSII reaction center subunit VI
8	EC, FB, GA, H (H, h, H1, h1)	Photosystem II reaction center protein H	polymer	67	7124.4	4	UniProt (A0A1C8XRP3) Pfam (PF00737)	Dunaliella salina	PSII-H
9	FC, GB, HA, I (I, i, I1, i1)	Photosystem II reaction center protein I	polymer	35	3929.6	4	UniProt (D0FXX5) Pfam (PF02532)	Dunaliella salina	PSII-I,PSII 4.8 kDa protein
10	GC, HB, IA, J (J, j, J1, j1)	PsbJ	polymer	36	3737.5	4		Dunaliella salina
11	HC, IB, JA, K (K, k, K1, k1)	Photosystem II reaction center protein K	polymer	37	4160.0	4	UniProt (D0FXX2) Pfam (PF02533)	Dunaliella salina	PSII-K
12	JB, KA, L (L, l, L1)	Photosystem II reaction center protein L	polymer	38	4417.2	3	UniProt (D0FY19) Pfam (PF02419)	Dunaliella salina	PSII-L
13	IC, KB, LA, M (M, m, M1, m1)	PsbM	polymer	31	3308.0	4		Dunaliella salina
14	JC, LB, MA, N (O, o, O1, o1)	PsbO	polymer	238	25874.9	4		Dunaliella salina
15	KC, MB, NA, O (P, p, P1, p1)	PsbP	polymer	187	20425.7	4		Dunaliella salina
16	LC, NB, OA, P (T, t, T1, t1)	Photosystem II reaction center protein T	polymer	30	3478.2	4	UniProt (D0FY04) Pfam (PF01405)	Dunaliella salina	PSII-T
17	MC, OB, PA, Q (W, w, W1, w1)	PsbW	polymer	44	4698.3	4		Dunaliella salina
18	NC, PB, QA, R (X, x, X1, x1)	PsbX	polymer	30	2854.4	4		Dunaliella salina
19	OC, QB, RA, S (Z, z, Z1, z1)	Photosystem II reaction center protein Z	polymer	61	6430.6	4	UniProt (D0FXZ2) Pfam (PF01737)	Dunaliella salina	PSII-Z
20	PC, RB, SA, T (N, n, N1, n1)	LHCII M3	polymer	222	24075.1	4		Dunaliella salina
21	QC, SB, TA, U (G, g, G1, g1)	Chlorophyll a-b binding protein, chloroplastic	polymer	221	23719.5	4	UniProt (A1XKU7) Pfam (PF00504)	Dunaliella salina
22	RC, TB, UA, V (R, r, R1, r1)	CP29	polymer	196	21163.7	4		Dunaliella salina
23	SC, UB, VA, W (S, s, S1, s1)	CP26	polymer	243	26233.6	4		Dunaliella salina
24	TC, VB, WA, X (Y, y, Y1, y1)	LHCII M1	polymer	222	23537.6	4		Dunaliella salina
25	UC, WB, XA, Y (U, u, U1, u1)	PsbU	polymer	27	3219.6	4		Dunaliella salina
26	RX, SQ, UJ, VC (a1, A1, a, A)	CA-MN4-O5 CLUSTER	non-polymer		339.8	4	Chemie (OEX)
27	SX, TQ, VJ, WC (a1, A1, a, A)	FE (II) ION	non-polymer		55.8	4	Chemie (FE2)
28	TX, UQ, UX, VQ, WJ... (a1, A1, a, A)	CHLORIDE ION	non-polymer		35.5	8	Chemie (CL)
29	ABA, ACA, AD, ADA, AJ... (n1, g1, A, s1, Y...)	CHLOROPHYLL A	non-polymer		893.5	312	Chemie (CLA)
30	AR, BK, CD, CK, DD... (A1, a, A, a1)	PHEOPHYTIN A	non-polymer		871.2	8	Chemie (PHO)
31	AE, AL, BE, BY, CR... (B, b, a1, A1, a...)	BETA-CAROTENE	non-polymer		536.9	32	Chemie (BCR)
32	AG, AS, CL, CY, DAA... (M, B1, b, a1, c1...)	1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL	non-polymer		795.1	20	Chemie (SQD)
33	AAA, AN, AT, AZ, BS... (c1, w, C1, b1, B1...)	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE	non-polymer		787.2	28	Chemie (LMG)
34	EY, FR, HK, ID, LEA... (a1, A1, a, A, y1...)	SPHINGOSINE	non-polymer		299.5	8	Chemie (SPH)
35	FY, GR, IK, JD (a1, A1, a, A)	SODIUM ION	non-polymer		23.0	4	Chemie (NA)
36	BL, CE, YY, ZR (b, B, b1, B1)	(1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol	non-polymer		568.9	4	Chemie (C7Z)
37	AF, AM, BF, BM, BZ... (C, c, b1, B1, b...)	DIGALACTOSYL DIACYL GLYCEROL (DGDG)	non-polymer		949.3	16	Chemie (DGD)
38	BG, CZ, DS, FL, GE... (T, b1, B1, b, B...)	1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE	non-polymer		705.0	12	Chemie (3PH)
39	BAA, CT, DZ, EM, ES... (c1, C1, b1, c, B1...)	DIACYL GLYCEROL	non-polymer		625.0	12	Chemie (DGA)
40	CAA, DT, FM, GF, ICA... (c1, C1, c, C, g1...)	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE	non-polymer		723.0	35	Chemie (LHG)
41	EAA, FT, HM, IF (c1, C1, c, C)	trimethyl-[(2~{R})-1-oxidanyl-1-oxidanylidene-4-[(2~{S})-2-[(1~{S})-1-oxidanyloctadecoxy]-3-[(1~{R})-1-oxidanyloctadecoxy]propoxy]butan-2-yl]azanium	non-polymer		773.2	4	Chemie (LMK)
42	FAA, GT, IM, JF (d1, D1, d, D)	BICARBONATE ION	non-polymer		61.0	4	Chemie (BCT)
43	JAA, KT, MM, NF (d1, D1, d, D)	2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE	non-polymer		749.2	4	Chemie (PL9)
44	OAA, PT, RM, SF (f1, F1, f, F)	PROTOPORPHYRIN IX CONTAINING FE	non-polymer		616.5	4	Chemie (HEM)
45	PAA, QT, SM, TF (h1, H1, h, H)	(3R)-beta,beta-caroten-3-ol	non-polymer		552.9	4	Chemie (RRX)
46	ST, VF (I1, I)	GLYCEROL	non-polymer		92.1	2	Chemie (GOL)
47	RAA, TAA, TT, UM, VT... (i1, k1, I1, i, K1...)	Tripalmitoylglycerol	non-polymer		807.3	8	Chemie (4RF)
48	AEA, AH, AO, AQ, AU... (y1, G, g, y, N1...)	CHLOROPHYLL B	non-polymer		907.5	92	Chemie (CHL)
49	ECA, FCA, GEA, HEA, HV... (g1, y1, G1, g, Y1...)	(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL	non-polymer		568.9	36	Chemie (LUT)
50	GCA, IEA, JV, KO, LX... (g1, y1, G1, g, Y1...)	(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL	non-polymer		600.9	16	Chemie (XAT)
51	AI, HCA, JEA, KV, LO... (R, g1, y1, G1, g...)	(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL	non-polymer		600.9	20	Chemie (NEX)
52	BI, VCA, YV, ZO (R, r1, R1, r)	DODECYL-BETA-D-MALTOSIDE	non-polymer		510.6	4	Chemie (LMT)
53	AP, CI, WCA, ZV (r, R, r1, R1)	ERGOSTEROL	non-polymer		396.6	4	Chemie (ERG)
54	QDA, TW, UP, WI (s1, S1, s, S)	(2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate	non-polymer		453.6	4	Chemie (LPX)
55	MEA, NEA, PX, QQ, QX... (y1, Y1, y, Y)	PHOSPHATIDYLETHANOLAMINE	non-polymer		734.0	8	Chemie (PTY)

Sequence modifications

G, g, G1, g1: 31 - 251 (UniProt: A1XKU7)

PDB	External Database	Details
Ala 180	Pro 181	conflict

Contents of the asymmetric unit

Polymers	Number of chains	99
	Total formula weight	1621880.4
Non-Polymers*	Number of molecules	721
	Total formula weight	558511.2
All*	Total formula weight	2180391.6

*Water molecules are not included.