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7PH2

Nanodisc reconstituted MsbA in complex with nanobodies, spin-labeled at position A60C

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BATP-dependent lipid A-core flippasepolymer59365760.92UniProt (P60752)
Pfam (PF00664)
Pfam (PF00005)
In PDB
Escherichia coli K-12Lipid A export ATP-binding/permease protein MsbA,Lipid flippase
2C, DNb_MsbA#1polymer11612369.92Vicugna pacos
3A(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{S},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-3,5-bis(oxidanyl)oxan-2-yl]oxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-4-[(3~{R})-3-nonanoyloxytetradecanoyl]oxy-5-[[(3~{R})-3-octanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{S},5~{S},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanylnonanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-oxan-2-yl]methoxy]-5-oxidanyl-oxane-2-carboxylic acidnon-polymer2206.51Chemie (EIW)
4C, D(1~{R},4~{R},11~{S},14~{S},19~{Z})-19-[2-[2,5-bis(oxidanylidene)pyrrolidin-1-yl]ethylimino]-7,8,17,18-tetraoxa-1,4,11,14-tetrazatricyclo[12.6.2.2^{4,11}]tetracosane-6,9,16-trionenon-polymer524.52Chemie (88T)
5C, DGADOLINIUM ATOMnon-polymer157.32Chemie (GD)
Sequence modifications
A, B: 1 - 582 (UniProt: P60752)
PDBExternal DatabaseDetails
Gly -10-expression tag
Pro -9-expression tag
Asp -8-expression tag
Glu -7-expression tag
Ala -6-expression tag
Glu -5-expression tag
Lys -4-expression tag
Leu -3-expression tag
Phe -2-expression tag
Asn -1-expression tag
Gln 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight156261.5
Non-Polymers*Number of molecules5
Total formula weight3570.1
All*Total formula weight159831.5
*Water molecules are not included.

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PDB entries from 2024-10-16

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