7PH2
Nanodisc reconstituted MsbA in complex with nanobodies, spin-labeled at position A60C
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | ATP-dependent lipid A-core flippase | polymer | 593 | 65760.9 | 2 | UniProt (P60752) Pfam (PF00664) Pfam (PF00005) In PDB | Escherichia coli K-12 | Lipid A export ATP-binding/permease protein MsbA,Lipid flippase |
2 | C, D | Nb_MsbA#1 | polymer | 116 | 12369.9 | 2 | Vicugna pacos | ||
3 | A | (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{S},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-3,5-bis(oxidanyl)oxan-2-yl]oxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-4-[(3~{R})-3-nonanoyloxytetradecanoyl]oxy-5-[[(3~{R})-3-octanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{S},5~{S},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanylnonanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-oxan-2-yl]methoxy]-5-oxidanyl-oxane-2-carboxylic acid | non-polymer | 2206.5 | 1 | Chemie (EIW) | |||
4 | C, D | (1~{R},4~{R},11~{S},14~{S},19~{Z})-19-[2-[2,5-bis(oxidanylidene)pyrrolidin-1-yl]ethylimino]-7,8,17,18-tetraoxa-1,4,11,14-tetrazatricyclo[12.6.2.2^{4,11}]tetracosane-6,9,16-trione | non-polymer | 524.5 | 2 | Chemie (88T) | |||
5 | C, D | GADOLINIUM ATOM | non-polymer | 157.3 | 2 | Chemie (GD) |
Sequence modifications
A, B: 1 - 582 (UniProt: P60752)
PDB | External Database | Details |
---|---|---|
Gly -10 | - | expression tag |
Pro -9 | - | expression tag |
Asp -8 | - | expression tag |
Glu -7 | - | expression tag |
Ala -6 | - | expression tag |
Glu -5 | - | expression tag |
Lys -4 | - | expression tag |
Leu -3 | - | expression tag |
Phe -2 | - | expression tag |
Asn -1 | - | expression tag |
Gln 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 156261.5 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 3570.1 | |
All* | Total formula weight | 159831.5 |