7P0T
CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH LCMV-DERIVED GP33 PEPTIDE with D-AMINOACID
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D | H-2 class I histocompatibility antigen, D-B alpha chain | polymer | 276 | 32087.7 | 2 | UniProt (P01899) Pfam (PF00129) Pfam (PF07654) In PDB | Mus musculus (House Mouse) | H-2D(B) |
| 2 | B, E | Beta-2-microglobulin | polymer | 101 | 11892.6 | 2 | UniProt (P01887) Pfam (PF07654) In PDB | Mus musculus (House Mouse) | |
| 3 | C, F | Derived peptide gp33-41 from LCMV | polymer | 9 | 1045.2 | 2 | UniProt (by SIFTS) (P09991) In PDB | Lymphocytic choriomeningitis mammarenavirus | |
| 4 | A, B, D, E | SULFATE ION | non-polymer | 96.1 | 8 | Chemie (SO4) | |||
| 5 | A | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 6 | water | water | 18.0 | 73 | Chemie (HOH) |
Sequence modifications
B, E: 1 - 99 (UniProt: P01887)
| PDB | External Database | Details |
|---|---|---|
| Met -1 | - | initiating methionine |
| Gly 0 | - | expression tag |
| Asp 85 | Ala 105 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 90051.1 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 804.0 | |
| All* | Total formula weight | 90855.0 |
