7P0T
CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH LCMV-DERIVED GP33 PEPTIDE with D-AMINOACID
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 11.2C |
Synchrotron site | ELETTRA |
Beamline | 11.2C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 120.512, 124.602, 92.915 |
Unit cell angles | 90.00, 126.87, 90.00 |
Refinement procedure
Resolution | 48.200 - 2.605 |
R-factor | 0.2017 |
Rwork | 0.197 |
R-free | 0.24400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1s7u |
RMSD bond length | 0.005 |
RMSD bond angle | 0.768 |
Data scaling software | STARANISO |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.200 | 2.893 |
High resolution limit [Å] | 2.600 | 2.605 |
Number of reflections | 22227 | 1309 |
<I/σ(I)> | 16.1 | |
Completeness [%] | 92.0 | |
Redundancy | 6.5 | |
CC(1/2) | 0.998 | 0.773 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.3 | 295 | 1.7 M Ammonium Sulphate, 100 mM Tris-HCl, pH 8.3 |