7OUG
STLV-1 intasome:B56 in complex with the strand-transfer inhibitor raltegravir
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, F, G (D, E, A, B) | Integrase | polymer | 301 | 33943.5 | 4 | UniProt (Q4QY51) Pfam (PF02022) Pfam (PF00665) Pfam (PF00552) | Simian T-lymphotropic virus 1 | |
| 2 | C, H (F, C) | Isoform 3 of PC4 and SFRS1-interacting protein,Isoform Gamma-2 of Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform | polymer | 697 | 80394.7 | 2 | UniProt (O75475) UniProt (Q13362) Pfam (PF00855) Pfam (PF01603) | Homo sapiens (Human) | PP2A B subunit isoform B'-gamma,PP2A B subunit isoform B56-gamma,PP2A B subunit isoform PR61-gamma,PP2A B subunit isoform R5-gamma,Renal carcinoma antigen NY-REN-29 |
| 3 | D, I (I, K) | DNA (5'-D(*AP*CP*TP*GP*TP*GP*TP*TP*TP*GP*GP*CP*GP*CP*TP*TP*CP*TP*CP*TP*C)-3') | polymer | 30 | 9221.9 | 2 | Simian T-lymphotropic virus 1 | ||
| 4 | E, J (J, L) | DNA (5'-D(*GP*AP*GP*AP*GP*AP*AP*GP*CP*GP*CP*CP*AP*AP*AP*CP*AP*CP*A)-3') | polymer | 28 | 8593.6 | 2 | Simian T-lymphotropic virus 1 | ||
| 5 | K, L, P, Q (D, E, A, B) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 6 | M, N, R, S (E, B) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 7 | O, T (E, B) | N-(4-fluorobenzyl)-5-hydroxy-1-methyl-2-(1-methyl-1-{[(5-methyl-1,3,4-oxadiazol-2-yl)carbonyl]amino}ethyl)-6-oxo-1,6-di hydropyrimidine-4-carboxamide | non-polymer | 444.4 | 2 | Chemie (RLT) | |||
| 8 | U, V (E, B) | water | water | 18.0 | 8 | Chemie (HOH) |
Sequence modifications
D, E, A, B: -2 - 297 (UniProt: Q4QY51)
F, C: -315 - 9 (UniProt: O75475)
F, C: 11 - 380 (UniProt: Q13362)
| PDB | External Database | Details |
|---|---|---|
| Gly -3 | - | expression tag |
| Glu -1 | Val 598 | expression tag |
| Phe 0 | Leu 599 | expression tag |
| Glu 219 | Ala 818 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Ser -316 | - | expression tag |
| Phe 10 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 332194.5 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1247.7 | |
| All* | Total formula weight | 333442.1 |






