7OUF
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor XZ450
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | D, E, A, B | Integrase | polymer | 301 | 33943.5 | 4 | UniProt (Q4QY51) Pfam (PF02022) Pfam (PF00665) Pfam (PF00552) In PDB | Simian T-lymphotropic virus 1 | |
2 | F, C | Isoform 3 of PC4 and SFRS1-interacting protein,Isoform Gamma-1 of Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform | polymer | 697 | 80394.7 | 2 | UniProt (O75475) UniProt (Q13362) Pfam (PF00855) Pfam (PF01603) In PDB | Homo sapiens (Human) | CLL-associated antigen KW-7,Dense fine speckles 70 kDa protein,DFS 70,Lens epithelium-derived growth factor,Transcriptional coactivator p75/p52,PP2A B subunit isoform B'-gamma,PP2A B subunit isoform B56-gamma,PP2A B subunit isoform PR61-gamma,PP2A B subunit isoform R5-gamma,Renal carcinoma antigen NY-REN-29 |
3 | I, K | DNA (5'-D(*AP*CP*TP*GP*TP*GP*TP*TP*TP*GP*GP*CP*GP*CP*TP*TP*CP*TP*CP*TP*C)-3') | polymer | 30 | 9221.9 | 2 | Simian T-lymphotropic virus 1 | ||
4 | J, H | DNA (5'-D(*GP*AP*GP*AP*GP*AP*AP*GP*CP*GP*CP*CP*AP*AP*AP*CP*AP*CP*A)-3') | polymer | 28 | 8593.6 | 2 | Simian T-lymphotropic virus 1 | ||
5 | D, E, A, B | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
6 | E, B | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
7 | E, B | 4-azanyl-~{N}-[[2,4-bis(fluoranyl)phenyl]methyl]-6-[3-(dimethylamino)-3-oxidanylidene-propyl]-1-oxidanyl-2-oxidanylidene-1,8-naphthyridine-3-carboxamide | non-polymer | 445.4 | 2 | Chemie (1L0) | |||
8 | water | water | 18.0 | 12 | Chemie (HOH) |
Sequence modifications
D, E, A, B: -2 - 297 (UniProt: Q4QY51)
F, C: -315 - 9 (UniProt: O75475)
F, C: 11 - 380 (UniProt: Q13362)
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Glu -1 | Val 598 | expression tag |
Phe 0 | Leu 599 | expression tag |
Glu 219 | Ala 818 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Ser -316 | - | expression tag |
Phe 10 | - | linker |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 332194.5 | |
Non-Polymers* | Number of molecules | 10 |
Total formula weight | 1249.7 | |
All* | Total formula weight | 333444.1 |