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7OO3

Pol II-CSB-CSA-DDB1-UVSSA (Structure1)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ADNA-directed RNA polymerase II subunit RPB1polymer1970217450.11UniProt (P11414)
Pfam (PF04997)
Pfam (PF05001)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
Pfam (PF04992)
Pfam (PF04990)
In PDB
Sus scrofa
2BDNA-directed RNA polymerase subunit betapolymer1174134041.41UniProt (I3LGP4)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF04566)
Pfam (PF04567)
Pfam (PF00562)
Pfam (PF04560)
In PDB
Sus scrofa (Pig)
3CDNA-directed RNA polymerase II subunit RPB3polymer27531439.11UniProt (I3LCH3)
Pfam (PF01193)
Pfam (PF01000)
In PDB
Sus scrofa (Pig)
4DRPOL4c domain-containing proteinpolymer14216331.31UniProt (A0A287ADR4)
Pfam (PF03874)
In PDB
Sus scrofa (Pig)
5EDNA-directed RNA polymerase II subunit Epolymer21024644.31UniProt (I3LSI7)
Pfam (PF03871)
Pfam (PF01191)
In PDB
Sus scrofa (Pig)RPB5 homolog
6FDNA-directed RNA polymerase II subunit Fpolymer12714477.01UniProt (F1SKN8)
Pfam (PF01192)
UniProt (by SIFTS) (A0A4X1VEK9)
In PDB
Sus scrofa (Pig)DNA-directed RNA polymerases I,II,and III subunit RPABC2,RPB6 homolog
7GDNA-directed RNA polymerase II subunit RPB7polymer17219314.31UniProt (I3LJZ9)
In PDB
Sus scrofa (Pig)
8HDNA-directed RNA polymerases I, II, and III subunit RPABC3polymer15017162.31UniProt (A0A4X1ULF2)
Pfam (PF03870)
UniProt (by SIFTS) (I3LCB2)
In PDB
Sus scrofa (Pig)
9IDNA-directed RNA polymerase II subunit RPB9polymer12514541.21UniProt (P60899)
Pfam (PF02150)
Pfam (PF01096)
In PDB
Sus scrofa (Pig)RNA polymerase II subunit B9,DNA-directed RNA polymerase II subunit I,RNA polymerase II 14.5 kDa subunit,RPB14.5
10JDNA-directed RNA polymerases I, II, and III subunit RPABC5polymer677655.11UniProt (A0A4X1VYD0)
Pfam (PF01194)
In PDB
Sus scrofa (Pig)
11KRNA_pol_L_2 domain-containing proteinpolymer11713310.31UniProt (A0A4X1UK25)
Pfam (PF13656)
UniProt (by SIFTS) (F1RKE4)
In PDB
Sus scrofa (Pig)
12LRNA polymerase II subunit Kpolymer587018.21UniProt (I3LN51)
Pfam (PF03604)
UniProt (by SIFTS) (A0A4X1TRS6)
In PDB
Sus scrofa (Pig)
13NNTSpolymer4714494.31Homo sapiens
14TTSpolymer4714269.11Homo sapiens
15PRNApolymer103264.01Homo sapiens
16aDNA excision repair protein ERCC-8polymer39644107.21UniProt (Q13216)
Pfam (PF00400)
In PDB
Homo sapiens (Human)Cockayne syndrome WD repeat protein CSA
17bDNA excision repair protein ERCC-6polymer1493168673.51UniProt (Q03468)
Pfam (PF00176)
Pfam (PF00271)
In PDB
Homo sapiens (Human)ATP-dependent helicase ERCC6,Cockayne syndrome protein CSB
18xCSB elementpolymer352996.71Homo sapiens (Human)
19cUV-stimulated scaffold protein Apolymer70980721.71UniProt (Q2YD98)
Pfam (PF20867)
Pfam (PF09740)
In PDB
Homo sapiens (Human)
20dDNA damage-binding protein 1polymer1143127369.71UniProt (Q16531)
Pfam (PF10433)
Pfam (PF03178)
In PDB
Homo sapiens (Human)DDB p127 subunit,DNA damage-binding protein a,DDBa,Damage-specific DNA-binding protein 1,HBV X-associated protein 1,XAP-1,UV-damaged DNA-binding factor,UV-damaged DNA-binding protein 1,UV-DDB 1,XPE-binding factor,XPE-BF,Xeroderma pigmentosum group E-complementing protein,XPCe
21I, J, L, A, B...ZINC IONnon-polymer65.48Chemie (ZN)
22AMAGNESIUM IONnon-polymer24.31Chemie (MG)
Sequence modifications
d: 1 - 1140 (UniProt: Q16531)
PDBExternal DatabaseDetails
Ser -2-expression tag
Asn -1-expression tag
Ala 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains20
Total formula weight973280.8
Non-Polymers*Number of molecules9
Total formula weight547.6
All*Total formula weight973828.4
*Water molecules are not included.

224004

PDB entries from 2024-08-21

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