7OMD
Crystal structure of azacoelenterazine-bound Renilla reniformis luciferase variant RLuc8-D162A
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Coelenterazine h 2-monooxygenase | polymer | 317 | 36903.2 | 2 | UniProt (P27652) | Renilla reniformis (Sea pansy) | Renilla-luciferin 2-monooxygenase,Renilla-type luciferase |
| 2 | C, F, G, H (A, B) | 6-(4-hydroxyphenyl)-2-[(4-hydroxyphenyl)methyl]-8-(phenylmethyl)-[1,2,4]triazolo[4,3-a]pyrazin-3-one | non-polymer | 424.5 | 4 | Chemie (VK8) | |||
| 3 | D (A) | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 1 | Chemie (DMS) | |||
| 4 | E (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 5 | I (B) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 6 | J, K (A, B) | water | water | 18.0 | 690 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 311 (UniProt: P27652)
| PDB | External Database | Details |
|---|---|---|
| Thr 55 | Ala 55 | conflict |
| Ala 124 | Cys 124 | conflict |
| Ala 130 | Ser 130 | conflict |
| Arg 136 | Lys 136 | conflict |
| Met 143 | Ala 143 | conflict |
| Ala 162 | Asp 162 | engineered mutation |
| Val 185 | Met 185 | conflict |
| Leu 253 | Met 253 | conflict |
| Leu 287 | Ser 287 | conflict |
| His 312 | - | expression tag |
| His 313 | - | expression tag |
| His 314 | - | expression tag |
| His 315 | - | expression tag |
| His 316 | - | expression tag |
| His 317 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 73806.3 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1917.5 | |
| All* | Total formula weight | 75723.8 |






