7OKJ
Crystal structure of human BCL6 BTB domain in complex with compound 12c and its enantiomer 12b
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | B-cell lymphoma 6 protein | polymer | 128 | 14536.9 | 1 | UniProt (P41182) Pfam (PF00651) | Homo sapiens (Human) | BCL-6,B-cell lymphoma 5 protein,BCL-5,Protein LAZ-3,Zinc finger and BTB domain-containing protein 27,Zinc finger protein 51 |
| 2 | B (B) | ALA-TRP-VAL-ILE-PRO-ALA | polymer | 6 | 655.8 | 1 | synthetic construct | ||
| 3 | C (A) | (2S)-2-[[6-[(2-chloranyl-3-cyano-pyridin-4-yl)amino]-2-oxidanylidene-1H-quinolin-4-yl]amino]-N-methyl-propanamide | non-polymer | 396.8 | 1 | Chemie (VHN) | |||
| 4 | D (A) | (2R)-2-[[6-[(2-chloranyl-3-cyano-pyridin-4-yl)amino]-2-oxidanylidene-1H-quinolin-4-yl]amino]-N-methyl-propanamide | non-polymer | 396.8 | 1 | Chemie (VHZ) | |||
| 5 | E, F, G, H, I... (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 6 | Chemie (EDO) | |||
| 6 | J, K (A) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 7 | M, N (A, B) | water | water | 18.0 | 198 | Chemie (HOH) |
Sequence modifications
A: 5 - 129 (UniProt: P41182)
| PDB | External Database | Details |
|---|---|---|
| Gly 2 | - | expression tag |
| Pro 3 | - | expression tag |
| Gly 4 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 15192.7 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1237.0 | |
| All* | Total formula weight | 16429.7 |
