7O9J
Crystal structure of DyP-type peroxidase from Dictyostelium discoideum in complex with an activated form of oxygen
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | DyPA | polymer | 311 | 35426.3 | 2 | UniProt (Q556V8) Pfam (PF04261) Pfam (PF20628) | Dictyostelium discoideum (Slime mold) | |
| 2 | C, I (A, B) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 2 | Chemie (HEM) | |||
| 3 | D, E, H (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
| 4 | F, J, K (A, B) | SODIUM ION | non-polymer | 23.0 | 3 | Chemie (NA) | |||
| 5 | G, L (A, B) | OXYGEN MOLECULE | non-polymer | 32.0 | 2 | Chemie (OXY) | |||
| 6 | M, N (A, B) | water | water | 18.0 | 618 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 306 (UniProt: Q556V8)
| PDB | External Database | Details |
|---|---|---|
| Gly -4 | - | expression tag |
| Pro -3 | - | expression tag |
| Leu -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 70852.6 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1552.1 | |
| All* | Total formula weight | 72404.8 |
