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7NQA

Crystal structure of Nucleoporin-98 nanobody MS98-6 complex solved at 2.2A resolution

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, B)
Nuclear pore complex protein Nup98-Nup96polymer15217275.42UniProt (A0A6I8SCP2)
Pfam (PF04096)
Xenopus tropicalis (tropical clawed frog)
2B, D
(D, C)
Anti-Nup98 Nanobody MS98-6polymer12413471.12Vicugna pacos (Alpaca Lama pacos)
3E
(D)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.11Chemie (TRS)
4F, G, H
(D, C)
SODIUM IONnon-polymer23.03Chemie (NA)
5I, J, K, L
(A, D, B, C)
waterwater18.0324Chemie (HOH)
Sequence modifications
A, B: 716 - 866 (UniProt: A0A6I8SCP2)
PDBExternal DatabaseDetails
Ser 715-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight61492.9
Non-Polymers*Number of molecules4
Total formula weight191.1
All*Total formula weight61684.0
*Water molecules are not included.

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PDB entries from 2025-06-11

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