7NP1
Crystal Structure of the SARS-CoV-2 Receptor Binding Domain in Complex with Antibody ION-360
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Spike protein S1 | polymer | 232 | 26099.4 | 4 | UniProt (P0DTC2) Pfam (PF09408) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | |
2 | H, I, J, K | Immunoglobulin gamma-1 heavy chain | polymer | 224 | 23397.2 | 4 | Homo sapiens | ||
3 | L, M, N, O | Immunoblobulin light chain | polymer | 217 | 23759.3 | 4 | Homo sapiens (Human) | ||
4 | E, F | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 2 | In PDB GlyTouCan (G86851RC) | |||
5 | B, D | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
6 | water | water | 18.0 | 71 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 319 - 539 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
- | His 519 | deletion |
- | Ala 520 | deletion |
Ala 540 | - | expression tag |
Ala 541 | - | expression tag |
Ala 542 | - | expression tag |
Gly 543 | - | expression tag |
Ser 544 | - | expression tag |
His 545 | - | expression tag |
His 546 | - | expression tag |
His 547 | - | expression tag |
His 548 | - | expression tag |
His 549 | - | expression tag |
His 550 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 293023.5 | |
Branched | Number of molecules | 2 |
Total formula weight | 734.7 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 442.4 | |
All* | Total formula weight | 294200.6 |