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7NP1

Crystal Structure of the SARS-CoV-2 Receptor Binding Domain in Complex with Antibody ION-360

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, DSpike protein S1polymer23226099.44UniProt (P0DTC2)
Pfam (PF09408)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2)
2H, I, J, KImmunoglobulin gamma-1 heavy chainpolymer22423397.24Homo sapiens
3L, M, N, OImmunoblobulin light chainpolymer21723759.34Homo sapiens (Human)
4E, Falpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched367.32In PDB
GlyTouCan (G86851RC)
5B, D2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
6waterwater18.071Chemie (HOH)
Sequence modifications
A, B, C, D: 319 - 539 (UniProt: P0DTC2)
PDBExternal DatabaseDetails
-His 519deletion
-Ala 520deletion
Ala 540-expression tag
Ala 541-expression tag
Ala 542-expression tag
Gly 543-expression tag
Ser 544-expression tag
His 545-expression tag
His 546-expression tag
His 547-expression tag
His 548-expression tag
His 549-expression tag
His 550-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight293023.5
BranchedNumber of molecules2
Total formula weight734.7
Non-Polymers*Number of molecules2
Total formula weight442.4
All*Total formula weight294200.6
*Water molecules are not included.

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PDB entries from 2024-06-12

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