7NP1
Crystal Structure of the SARS-CoV-2 Receptor Binding Domain in Complex with Antibody ION-360
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE MASSIF-1 |
| Synchrotron site | ESRF |
| Beamline | MASSIF-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-11-05 |
| Detector | DECTRIS PILATUS3 2M |
| Wavelength(s) | 0.965459 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 91.049, 107.899, 181.628 |
| Unit cell angles | 90.00, 99.45, 90.00 |
Refinement procedure
| Resolution | 48.280 - 2.800 |
| R-factor | 0.2369 |
| Rwork | 0.232 |
| R-free | 0.28100 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7bnv |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.802 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PDB-REDO (v1.0) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.330 | 2.900 |
| High resolution limit [Å] | 2.800 | 2.800 |
| Rmerge | 0.063 | |
| Number of reflections | 85521 | 8446 |
| <I/σ(I)> | 5.79 | |
| Completeness [%] | 99.8 | |
| Redundancy | 2 | |
| CC(1/2) | 0.993 | 0.494 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 292 | 16% PEG3350 0.2 M ammonium citrate tribasic |






