7NOX
Structure of SGBP BO2743 from Bacteroides ovatus in complex with mixed-linked gluco-nonasaccharide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Surface glycan-binding protein BO2743 | polymer | 598 | 67918.4 | 2 | UniProt (A7LY27) Pfam (PF12771) In PDB | Bacteroides ovatus ATCC 8483 | |
2 | C, D | beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose | branched | 1477.3 | 2 | In PDB GlyTouCan (G43976CC) | |||
3 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
4 | A, B | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) | |||
5 | B, A | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 8 | Chemie (PGE) | |||
6 | B, A | SODIUM ION | non-polymer | 23.0 | 3 | Chemie (NA) | |||
7 | B, A | AZIDE ION | non-polymer | 42.0 | 14 | Chemie (AZI) | |||
8 | B | TRIS(HYDROXYETHYL)AMINOMETHANE | non-polymer | 163.2 | 1 | Chemie (TAM) | |||
9 | water | water | 18.0 | 990 | Chemie (HOH) |
Sequence modifications
A, B: 39 - 558 (UniProt: A7LY27)
PDB | External Database | Details |
---|---|---|
Met -38 | - | initiating methionine |
His -37 | - | expression tag |
His -36 | - | expression tag |
His -35 | - | expression tag |
His -34 | - | expression tag |
His -33 | - | expression tag |
His -32 | - | expression tag |
Ser -31 | - | expression tag |
Ser -30 | - | expression tag |
Gly -29 | - | expression tag |
Val -28 | - | expression tag |
Asp -27 | - | expression tag |
Asn -26 | - | expression tag |
Lys -25 | - | expression tag |
Phe -24 | - | expression tag |
Asn -23 | - | expression tag |
Lys -22 | - | expression tag |
Glu -21 | - | expression tag |
Arg -20 | - | expression tag |
Arg -19 | - | expression tag |
Arg -18 | - | expression tag |
Ala -17 | - | expression tag |
Arg -16 | - | expression tag |
Arg -15 | - | expression tag |
Glu -14 | - | expression tag |
Ile -13 | - | expression tag |
Arg -12 | - | expression tag |
His -11 | - | expression tag |
Leu -10 | - | expression tag |
Pro -9 | - | expression tag |
Asn -8 | - | expression tag |
Leu -7 | - | expression tag |
Asn -6 | - | expression tag |
Arg -5 | - | expression tag |
Glu -4 | - | expression tag |
Gln -3 | - | expression tag |
Arg -2 | - | expression tag |
Arg -1 | - | expression tag |
Ala 0 | - | expression tag |
Phe 1 | - | expression tag |
Ile 2 | - | expression tag |
Arg 3 | - | expression tag |
Ser 4 | - | expression tag |
Leu 5 | - | expression tag |
Arg 6 | - | expression tag |
Asp 7 | - | expression tag |
Asp 8 | - | expression tag |
Pro 9 | - | expression tag |
Ser 10 | - | expression tag |
Gln 11 | - | expression tag |
Ser 12 | - | expression tag |
Ala 13 | - | expression tag |
Asn 14 | - | expression tag |
Leu 15 | - | expression tag |
Leu 16 | - | expression tag |
Ala 17 | - | expression tag |
Glu 18 | - | expression tag |
Ala 19 | - | expression tag |
Lys 20 | - | expression tag |
Lys 21 | - | expression tag |
Leu 22 | - | expression tag |
Asn 23 | - | expression tag |
Asp 24 | - | expression tag |
Ala 25 | - | expression tag |
Gln 26 | - | expression tag |
Pro 27 | - | expression tag |
Lys 28 | - | expression tag |
Gly 29 | - | expression tag |
Thr 30 | - | expression tag |
Glu 31 | - | expression tag |
Asn 32 | - | expression tag |
Leu 33 | - | expression tag |
Tyr 34 | - | expression tag |
Phe 35 | - | expression tag |
Gln 36 | - | expression tag |
Ser 37 | - | expression tag |
Met 38 | - | expression tag |
Gln 559 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 135836.9 | |
Branched | Number of molecules | 2 |
Total formula weight | 2954.6 | |
Non-Polymers* | Number of molecules | 33 |
Total formula weight | 2530.9 | |
All* | Total formula weight | 141322.4 |