7NHK
LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | 0 | ABC-F type ribosomal protection protein Lsa(A) | polymer | 541 | 62372.4 | 1 | UniProt (A0A4U4C430) In PDB | Enterococcus faecalis | |
2 | 1 | 50S ribosomal protein L29 | polymer | 62 | 7342.6 | 1 | UniProt (A0A1B4XKV0) Pfam (PF00831) In PDB | Enterococcus faecalis | |
3 | 2 | 50S ribosomal protein L30 | polymer | 59 | 6365.5 | 1 | UniProt (A0A1B4XKW1) Pfam (PF00327) In PDB | Enterococcus faecalis | |
4 | 4 | 50S ribosomal protein L32 | polymer | 59 | 6548.8 | 1 | UniProt (A0A1B4XMM2) Pfam (PF01783) In PDB | Enterococcus faecalis | |
5 | 5 | 50S ribosomal protein L33 | polymer | 49 | 6052.0 | 1 | UniProt (A0A1B4XR98) Pfam (PF00471) In PDB | Enterococcus faecalis | |
6 | 6 | 50S ribosomal protein L34 | polymer | 44 | 5373.5 | 1 | UniProt (A0A1B4XSI4) Pfam (PF00468) In PDB | Enterococcus faecalis | |
7 | 7 | 50S ribosomal protein L35 | polymer | 66 | 7727.3 | 1 | UniProt (A0A1B4XM73) Pfam (PF01632) In PDB | Enterococcus faecalis | |
8 | 8 | 50S ribosomal protein L36 | polymer | 38 | 4440.5 | 1 | UniProt (A0A1B4XKT9) Pfam (PF00444) In PDB | Enterococcus faecalis | |
9 | A | 23S rRNA | polymer | 2912 | 944000.6 | 1 | Enterococcus faecalis | ||
10 | B | 5S rRNA | polymer | 116 | 37433.2 | 1 | Enterococcus faecalis | ||
11 | G | 50S ribosomal protein L2 | polymer | 276 | 30291.0 | 1 | UniProt (A0A1B4XKR6) Pfam (PF00181) Pfam (PF03947) In PDB | Enterococcus faecalis | |
12 | H | 50S ribosomal protein L3 | polymer | 209 | 22758.5 | 1 | UniProt (A0A1B4XKR3) Pfam (PF00297) In PDB | Enterococcus faecalis | |
13 | I | 50S ribosomal protein L4 | polymer | 207 | 22549.7 | 1 | UniProt (A0A4U4BZI1) In PDB | Enterococcus faecalis | |
14 | J | 50S ribosomal protein L5 | polymer | 179 | 20123.5 | 1 | UniProt (A0A1B4XKS2) Pfam (PF00281) Pfam (PF00673) In PDB | Enterococcus faecalis | |
15 | K | 50S ribosomal protein L6 | polymer | 178 | 19437.3 | 1 | UniProt (A0A4U4BXV7) In PDB | Enterococcus faecalis | |
16 | M | 50S ribosomal protein L13 | polymer | 147 | 16325.9 | 1 | UniProt (A0A1B4XSB2) Pfam (PF00572) In PDB | Enterococcus faecalis | |
17 | N | 50S ribosomal protein L14 | polymer | 122 | 13165.3 | 1 | UniProt (A0A1B4XKS1) Pfam (PF00238) In PDB | Enterococcus faecalis | |
18 | O | 50S ribosomal protein L15 | polymer | 146 | 15602.9 | 1 | UniProt (A0A1B4XKT1) Pfam (PF00828) In PDB | Enterococcus faecalis | |
19 | P | 50S ribosomal protein L16 | polymer | 144 | 16261.2 | 1 | UniProt (A0A1B4XKU1) Pfam (PF00252) In PDB | Enterococcus faecalis | |
20 | Q | 50S ribosomal protein L17 | polymer | 127 | 14503.7 | 1 | UniProt (A0A1B4XKX1) Pfam (PF01196) In PDB | Enterococcus faecalis | |
21 | R | 50S ribosomal protein L18 | polymer | 118 | 12937.8 | 1 | UniProt (A0A1B4XKS7) Pfam (PF00861) In PDB | Enterococcus faecalis | |
22 | S | 50S ribosomal protein L19 | polymer | 115 | 13244.5 | 1 | UniProt (A0A1B4XPL8) Pfam (PF01245) In PDB | Enterococcus faecalis | |
23 | T | 50S ribosomal protein L20 | polymer | 119 | 13674.2 | 1 | UniProt (A0A1B4XM76) Pfam (PF00453) In PDB | Enterococcus faecalis | |
24 | U | 50S ribosomal protein L21 | polymer | 102 | 11167.0 | 1 | UniProt (A0A1B4XMC1) Pfam (PF00829) In PDB | Enterococcus faecalis | |
25 | V | 50S ribosomal protein L22 | polymer | 115 | 12473.5 | 1 | UniProt (A0A1B4XKT6) Pfam (PF00237) In PDB | Enterococcus faecalis | |
26 | W | 50S ribosomal protein L23 | polymer | 96 | 11089.0 | 1 | UniProt (A0A1B4XKR7) Pfam (PF00276) In PDB | Enterococcus faecalis | |
27 | X | 50S ribosomal protein L24 | polymer | 103 | 11137.1 | 1 | UniProt (A0A1B4XKV5) Pfam (PF00467) Pfam (PF17136) In PDB | Enterococcus faecalis | |
28 | Y | 50S ribosomal protein L27 | polymer | 95 | 10175.6 | 1 | UniProt (A0A1B4XMB1) Pfam (PF01016) In PDB | Enterococcus faecalis | |
29 | Z | 50S ribosomal protein L28 | polymer | 62 | 7005.3 | 1 | UniProt (A0A1B4XRZ8) Pfam (PF00830) In PDB | Enterococcus faecalis | |
30 | a | 16S rRNA | polymer | 1558 | 504170.6 | 1 | Enterococcus faecalis | ||
31 | c | 30S ribosomal protein S2 | polymer | 261 | 29500.6 | 1 | UniProt (A0A1B4XQD8) Pfam (PF00318) In PDB | Enterococcus faecalis | |
32 | d | 30S ribosomal protein S3 | polymer | 218 | 24415.2 | 1 | UniProt (A0A1B4XKR8) Pfam (PF07650) Pfam (PF00189) In PDB | Enterococcus faecalis | |
33 | e | 30S ribosomal protein S4 | polymer | 203 | 23273.7 | 1 | UniProt (A0A1B4XRV7) Pfam (PF00163) Pfam (PF01479) In PDB | Enterococcus faecalis | |
34 | f | 30S ribosomal protein S5 | polymer | 166 | 17444.4 | 1 | UniProt (A0A1B4XKW0) Pfam (PF00333) Pfam (PF03719) In PDB | Enterococcus faecalis | |
35 | g | 30S ribosomal protein S6 | polymer | 100 | 11621.2 | 1 | UniProt (A0A1B4XKB6) Pfam (PF01250) In PDB | Enterococcus faecalis | |
36 | h | 30S ribosomal protein S7 | polymer | 156 | 17864.6 | 1 | UniProt (A0A1B4XKQ3) Pfam (PF00177) In PDB | Enterococcus faecalis | |
37 | i | 30S ribosomal protein S8 | polymer | 132 | 14936.4 | 1 | UniProt (A0A1B4XKS6) Pfam (PF00410) In PDB | Enterococcus faecalis | |
38 | j | 30S ribosomal protein S9 | polymer | 130 | 14271.5 | 1 | UniProt (A0A1B4XSA2) Pfam (PF00380) In PDB | Enterococcus faecalis | |
39 | k | 30S ribosomal protein S10 | polymer | 102 | 11731.7 | 1 | UniProt (A0A1B4XKR5) Pfam (PF00338) In PDB | Enterococcus faecalis | |
40 | l | 30S ribosomal protein S11 | polymer | 129 | 13739.9 | 1 | UniProt (A0A1B4XKV1) Pfam (PF00411) In PDB | Enterococcus faecalis | |
41 | m | 30S ribosomal protein S12 | polymer | 137 | 15309.8 | 1 | UniProt (A0A1B4XKQ7) Pfam (PF00164) In PDB | Enterococcus faecalis | |
42 | n | 30S ribosomal protein S13 | polymer | 121 | 13595.8 | 1 | UniProt (A0A1B4XKT7) Pfam (PF00416) In PDB | Enterococcus faecalis | |
43 | o | 30S ribosomal protein S14 type Z | polymer | 61 | 7172.6 | 1 | UniProt (A0A1B4XKT0) Pfam (PF00253) In PDB | Enterococcus faecalis | |
44 | p | 30S ribosomal protein S15 | polymer | 89 | 10668.2 | 1 | UniProt (A0A1B4XRW3) Pfam (PF00312) In PDB | Enterococcus faecalis | |
45 | q | 30S ribosomal protein S16 | polymer | 91 | 10356.1 | 1 | UniProt (A0A1B4XP69) Pfam (PF00886) In PDB | Enterococcus faecalis | |
46 | r | 30S ribosomal protein S17 | polymer | 88 | 10332.1 | 1 | UniProt (A0A1B4XKS3) Pfam (PF00366) In PDB | Enterococcus faecalis | |
47 | s | 30S ribosomal protein S18 | polymer | 79 | 9262.9 | 1 | UniProt (A0A1B4XKB3) Pfam (PF01084) In PDB | Enterococcus faecalis | |
48 | t | 30S ribosomal protein S19 | polymer | 92 | 10586.3 | 1 | UniProt (A0A1B4XKS0) Pfam (PF00203) In PDB | Enterococcus faecalis | |
49 | u | 30S ribosomal protein S20 | polymer | 83 | 8972.3 | 1 | UniProt (A0A1B4XQJ7) Pfam (PF01649) In PDB | Enterococcus faecalis | |
50 | D | tRNA-fMETi | polymer | 77 | 24811.8 | 1 | Enterococcus faecalis | ||
51 | b | RNA (5'-R(P*GP*GP*AP*GP*GP*UP*AP*UP*GP*AP*CP*AP*A)-3') | polymer | 20 | 5617.3 | 1 | Enterococcus faecalis | ||
52 | F | 50S ribosomal protein L1 | polymer | 229 | 24495.2 | 1 | UniProt (A0A1B4XR48) Pfam (PF00687) In PDB | Enterococcus faecalis | |
53 | 3 | 50S ribosomal protein L31 type B | polymer | 89 | 10138.1 | 1 | UniProt (A0A1B4XMV6) Pfam (PF01197) In PDB | Enterococcus faecalis | |
54 | 0 | ADENOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 2 | Chemie (ATP) | |||
55 | A, a, 0, D, B... | MAGNESIUM ION | non-polymer | 24.3 | 147 | Chemie (MG) | |||
56 | o, 4, 8 | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
57 | A, a, P | POTASSIUM ION | non-polymer | 39.1 | 29 | Chemie (K) | |||
58 | a, A | 1,4-DIAMINOBUTANE | non-polymer | 88.2 | 4 | Chemie (PUT) |
Sequence modifications
0: 1 - 498 (UniProt: A0A4U4C430)
PDB | External Database | Details |
---|---|---|
Gln 142 | Glu 142 | engineered mutation |
Gln 452 | Glu 452 | engineered mutation |
Gly 499 | - | expression tag |
His 500 | - | expression tag |
His 501 | - | expression tag |
His 502 | - | expression tag |
His 503 | - | expression tag |
His 504 | - | expression tag |
His 505 | - | expression tag |
Ala 506 | - | expression tag |
Lys 507 | - | expression tag |
Gly 508 | - | expression tag |
Gly 509 | - | expression tag |
Glu 510 | - | expression tag |
Asn 511 | - | expression tag |
Leu 512 | - | expression tag |
Tyr 513 | - | expression tag |
Phe 514 | - | expression tag |
Gln 515 | - | expression tag |
Gly 516 | - | expression tag |
Val 517 | - | expression tag |
Ala 518 | - | expression tag |
Asp 519 | - | expression tag |
Tyr 520 | - | expression tag |
Lys 521 | - | expression tag |
Asp 522 | - | expression tag |
His 523 | - | expression tag |
Asp 524 | - | expression tag |
Gly 525 | - | expression tag |
Asp 526 | - | expression tag |
Tyr 527 | - | expression tag |
Lys 528 | - | expression tag |
Asp 529 | - | expression tag |
His 530 | - | expression tag |
Asp 531 | - | expression tag |
Ile 532 | - | expression tag |
Asp 533 | - | expression tag |
Tyr 534 | - | expression tag |
Lys 535 | - | expression tag |
Asp 536 | - | expression tag |
Asp 537 | - | expression tag |
Asp 538 | - | expression tag |
Asp 539 | - | expression tag |
Lys 540 | - | expression tag |
Gly 541 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 53 |
Total formula weight | 2225867.5 | |
Non-Polymers* | Number of molecules | 185 |
Total formula weight | 6269.9 | |
All* | Total formula weight | 2232137.4 |