7N86
Crystal Structure of Human Protocadherin-24 EC1-2 Form II
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Cadherin-related family member 2 | polymer | 238 | 26042.3 | 4 | UniProt (Q9BYE9) Pfam (PF00028) | Homo sapiens (Human) | Protocadherin LKC,PC-LKC,Protocadherin-24 |
| 2 | E, F, G, H (E, F, G, H) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 4 | In PDB GlyTouCan (G15407YE) | |||
| 3 | I (A) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 1 | Chemie (TRS) | |||
| 4 | BA, CA, DA, EA, J... (D, A, B, C) | CALCIUM ION | non-polymer | 40.1 | 14 | Chemie (CA) | |||
| 5 | AA, FA, M, S, Y... (C, D, A, B) | CHLORIDE ION | non-polymer | 35.5 | 6 | Chemie (CL) | |||
| 6 | N, T (A, B) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 7 | R (B) | IODIDE ION | non-polymer | 126.9 | 1 | Chemie (IOD) | |||
| 8 | GA, HA, IA, JA (A, B, C, D) | water | water | 18.0 | 33 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 220 (UniProt: Q9BYE9)
| PDB | External Database | Details |
|---|---|---|
| Thr 221 | - | expression tag |
| Val 222 | - | expression tag |
| Pro 223 | - | expression tag |
| Arg 224 | - | expression tag |
| Ala 225 | - | expression tag |
| Arg 226 | - | expression tag |
| Asp 227 | - | expression tag |
| Pro 228 | - | expression tag |
| Pro 229 | - | expression tag |
| Val 230 | - | expression tag |
| Gly 231 | - | expression tag |
| Gly 232 | - | expression tag |
| His 233 | - | expression tag |
| His 234 | - | expression tag |
| His 235 | - | expression tag |
| His 236 | - | expression tag |
| His 237 | - | expression tag |
| His 238 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 104169.4 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 2346.2 | |
| Non-Polymers* | Number of molecules | 24 |
| Total formula weight | 1068.8 | |
| All* | Total formula weight | 107584.4 |






