7MZM
SARS-CoV-2 receptor binding domain bound to Fab PDI 215
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (H) | PDI 215 heavy chain | polymer | 239 | 25594.4 | 1 | Homo sapiens (human) | ||
| 2 | B (L) | PDI 215 light chain | polymer | 216 | 23559.1 | 1 | Homo sapiens (human) | ||
| 3 | C (A) | Spike protein S1 | polymer | 205 | 23073.8 | 1 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | |
| 4 | D (B) | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 1 | In PDB GlyTouCan (G86851RC) | |||
| 5 | E, F (A) | ISOPROPYL ALCOHOL | non-polymer | 60.1 | 2 | Chemie (IPA) | |||
| 6 | G, H, I (H, L, A) | water | water | 18.0 | 107 | Chemie (HOH) |
Sequence modifications
A: 331 - 527 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Gly 528 | - | expression tag |
| Ser 529 | - | expression tag |
| His 530 | - | expression tag |
| His 531 | - | expression tag |
| His 532 | - | expression tag |
| His 533 | - | expression tag |
| His 534 | - | expression tag |
| His 535 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 72227.3 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 367.3 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 120.2 | |
| All* | Total formula weight | 72714.9 |
